Helicobacter pylori J99

  Contributor : ASTRA

 
Helicobacter pylori 26695
Helicobacter pylori J99
                   
List of IS606 copies

 

IS name

orf name

Simililarity DNA

Similarity AA

Family

orf L end

orf R end

orf bp

# aas

(1) 

(2) 

ISLend

ISRend

Length

DR

IR

IS coordinates present

Length

Comments

IS606-P

 

IS606(98%)

 

IS605

             

     

547262(1840)-547194(1908)

69

 

IS606-P

 

IS606(92%)

 

IS605

                     

510207(1503)-510261(1557)

55

 

IS606-P

 

IS606(98%)

 

IS605

                     

510320(1604)-510398(1682)

79

 

IS606-P

 

IS606(100%)

 

IS605

       

c

     547135      

547152(1952)-547135(1967)

18

 

IS606A

 jhp0826

IS606(98%)

 IS606 TnpB (97%)

   910294

908966  

1329  

 442

c

 t

 908911

1738

0

5/8

910648(1)-910320(328)
910321(558)-909546(1333)
909501(1378)-909322(1557)
909275(1604)-908911(1968)

1738

 

jhp0827

IS606 TnpA

910322

910516

195

64

 t  910648  

Bold is for complete copies of an IS
Italic is for partial copies of an IS
          (1)"c" is for complementary strand
(2)"t" is for transposase

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