Deinococcus radiodurans, chromosome 2

Source : TIGR

Chromosome 1 Chromosome 2 Megaplasmid MP1 Plasmid CP1		List of IS2621 copies, IRs , transposase alignment		List of ISDra3 copies, IRs
		List of ISDra1 copies, IRs , transposase alignment		List of ISDra4 copies, IRs
		List of ISDra2 copies, IRs , transposase alignment		List of ISDra5 copies
		List of ISDra6 copies, IRs

IS name	orf name	Simililarity DNA	Similarity AA	Family	orf L end	orf R end	orf bp	# aas	(1)	(2)	ISLend	ISRend	Length	DR	IR	IS coordinates present	Length	Comments
	DRA0075			IS481 ou IS3	80554	82683				t
IS2621-P		IS2621(96%)		IS4												21723(1)-21747(25)	25
IS2621-P		IS2621(96%)		IS4												170602(1)-170578(25)	25
IS2621G	DRA0253	IS2621(89%)	IS2621(93%)	IS4	266944	266288	657	218	c	t	267592	266271	1322	6	19			End of the transposase (199 to 416). Mutations at positions 213 F-->L, 220-221 KY-->ND, 234 P-->K, 254-256 ETS-->ARP, 338 P-->Q, 363 E-->G and 390 K-->N. Point mutation at position 400 causing a premature stop
	Our translation		IS2621(94%)		266159	266159	1251	416										Mutations at positions 1-3 MNT-->VKS, 46 V-->A, 69 P-->D, 145 F-->L, 180 P-->Q, 197 S-->P, 213 F-->L, 220-221 KY-->ND, 234 P-->K, 254-256 ETS-->ARP, 338 P-->Q, 363 E-->G and 390 K-->N. Point mutation at position 400 causing a premature stop.

Bold is for complete copies of an IS Italic is for partial copies of an IS

(1)"c" is for complementary strand (2)"t" is for transposase

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