Plasmid name |
Plasmid size (bp) |
Plasmid type |
Bacterial Host |
IS family[members - copy number] |
Accession number |
| PTi-sakuraa | 206,479 |
Circular |
Agrobacterium tumefaciens | IS21 [1
- 1] IS110 [1 - 1] IS3 [1 - 1] |
AB016260 |
| Octopine-type Tia | 194,140 |
Circular |
Agrobacterium tumefaciens | IS110
[ 1 - 1 ] IS66 [ 3 - 3p] IS3 [2 - 2] IS5 [ 1 - 1] ISNCY [ 2 - 2] |
AF242881 |
| ece1 | 39,456 |
Circular |
Aquifex aeolicus | No IS | AE000667 |
| pXO1 | 181,654 |
Circular |
Bacillus anthracis | IS3 [1 - 2] IS4 [1 - 3] IS5 [1 - 1] |
AF065404 |
| pXO2a | 96,231 |
|
Bacillus anthracis | IS4 [2 - 2] | AF188935 |
| cp9 | 9,386 |
Circular |
Borrelia burgdorferi | No IS | AE000791 |
| cp26 | 26,498 |
Circular |
Borrelia burgdorferi | No IS | AE000792 |
| lp17 | 16,823 |
Linear |
Borrelia burgdorferi | IS605 [2 - 2] | AE000793 |
| lp25 | 24,177 |
Linear |
Borrelia burgdorferi | No IS | AE000785 |
| lp28-1 | 26,921 |
Linear |
Borrelia burgdorferi | No IS | AE000794 |
| lp28-4 | 27,323 |
Linear |
Borrelia burgdorferi | No IS | AE000789 |
| lp28-3 | 28,601 |
Linear |
Borrelia burgdorferi | IS605 [1 - 1] | AE000784 |
| lp28-2 | 29,766 |
Linear |
Borrelia burgdorferi | IS605 [1 - 1] | AE000786 |
| lp36 | 36,849 |
Linear |
Borrelia burgdorferi | IS605 [1 - 1] | AE000788 |
| lp38 | 38,829 |
Linear |
Borrelia burgdorferi | IS605 [1 - 1] | AE000787 |
| lp54 | 53,561 |
Linear |
Borrelia burgdorferi | No IS | AE000790 |
| pSOL1a | 192,060 |
Circular |
Clostridium acetobutylicum | Tn3 [1 - 1] | AE001438 |
| MP1 | 177,466 |
Circular |
Deinococcus radiodurans | IS4
[2 - 13/5p] IS630 [3 - 4] |
AE001826 |
| CP1 | 45,704 |
Circular |
Deinococcus radiodurans | IS4
[1 - 5/4p] IS5 [1 - 1] IS630 [1 - 1] ISNCY [1 - 1/1p] |
AE001827 |
| R751* | 53,339 |
Circular |
Enterobacter aerogenes | IS110 [2 - 2] | U67194 |
| pO157 | 92,077 |
Circular |
Escherichia coli | IS1 [1 - 1p] IS3 [4 - 7/5p] IS21 [1 - 1p] IS91 [1 - 1p] |
AF074613 |
| pB171* | 68,817 |
Circular |
Escherichia coli | IS1 [2
- 2] IS3 [1 - 2] IS4 [1 - 1] IS21 [1 - 2] IS30 [1 - 1] |
AB024946 |
| pNRC100 | 191,346 |
Circular |
Halobacterium sp. NRC-1 | IS4 [4 - 21/1p] IS5 [2 - 4] IS605 [1 - 1/1p] ISNCY [3 - 5/1p] |
AF016485 |
| pNRC200 | 365,425 |
Circular |
Halobacterium sp. NRC-1 | IS4 [4 - 32/5] IS5 [2 - 5] IS605 [1 - 4/3p] ISNCY [3 - 5/1p] |
NC_002608 |
| pMRC01 | 60,232 |
Circular |
Lactococcus lactis | IS6 [1 - 3/1p] IS30 [1 - 1] |
AE001272 |
| pFZ1 | 11,014 |
Circular |
Methanobacterium thermoformicicum | No IS cited | X68367 |
| pFV1 | 13,514 |
Circular |
Methanobacterium thermoformicicum | No IS cited | X68366 |
| p16 | 16,55 |
Circular |
Methanococcus jannaschii | No IS cited | L77119 |
| p58 | 58,407 |
Circular |
Methanococcus jannaschii | No IS cited | L77118 |
| pNGR234a | 536,165 |
Circular |
Rhizobium sp. NGR234 | IS3 [1 - 3] IS4 [1 - 1] IS5 [1 - 1] IS21 [1 - 8/1p] IS91 [1 - 1] IS110 [1 - 6/1p] ISNCY [2 - 5] |
AE00064 to AE00109 |
| R27* | 180,461 |
Circular |
Salmonella typhi | IS1 [ 1 - 3
] IS3 [ 1 - 1 ] IS4 [ 1 - 2 ] IS30 [ 1 - 1 ] ISNCY [ 1 - 1 ] |
AF250878 |
| pNL1 | 184,457 |
Circular |
Sphingomonas aromaticivorans | IS630 [2 - 2] | AF079317 |
| pSCL | 11,696 |
Linear |
Streptomyces clavuligerus | No IS cited | X54107 |
| pJV1 | 11,143 |
Circular |
Streptomyces phaeochromogenes | No IS cited | U23762 |
| pYVe227 | 69,673 |
Circular |
Yersinia enterocolitica | Tn3 [1 - 1] | AF102990 |
| pPCP1 | 9,61 |
Circular |
Yersinia pestis | IS21 [1 - 1] | AF053945 |
| pCD1 | 70,504 |
Circular |
Yersinia pestis | IS3 [4 - 4] IS6 [1 - 1] IS21 [2 - 3/1p] IS256 [2 - 4/2p] IS605 [1 - 2] |
AF053946 |
| pMT1 | 100,984 |
Circular |
Yersinia pestis | IS3 [1 - 1p] IS21 [1 - 2] IS110 [1 - 1] IS256 [1 - 1] IS605 [1 - 1] |
AF053947 |
A Preliminary Assessment of IS Distribution in Available Bacterial Genomes. In the majority of cases, the IS elements indicated were located from the available annotations of transposase. a indicates genomes analyzed in detail by us. The correct family assignment for ISs identified by their annotations was confirmed and those whose annotations did not assign them to a family were analyzed and identified. Total number of copies is indicated between square brackets together with those that are only partial copies, indicated by a lower case "p", where known. Not all genomes have yet been analyzed at this level. In the case of the IS200/IS605/IS607 complex, IS200 indicates that only orfA is present.