Organism

Halobacterium sp. NRC-1
Chromosome
Size: 2014239 bp

Accession Number: NC_002607
Pubmed: 11016950

Archaea /Euryarchaeota /Halobacteria /Halobacteriales /Halobacteriaceae /Halobacterium /

Relevant Replicons and Strains

ISs Number Total ISs (bp) % of Genome
Full ISs 23 28583 1.42
Partial ISs 8 5588 0.28
Full MITEs 1 180 0.01
Partial MITEs 0 0 0
Total 32 34351 1.7

The table below gives a list of all ISs in this replicon.
Click on a name to obtain details of the IS

All_Iss
IS Family Group Strand Full IS
Coordinates
Length (bp) Partial IS
Coordinates
Partial IS
Coordinates
on IS
Length (bp) Comments
Name Begin End Begin End Begin End
Partial IS200/IS605 . - - - - 12614 11478 - - 1137 Partial
ISH29 IS6 . + - - - 13157 13448 406 697 292 Partial
ISH12 IS200/IS605 . - - - - 14362 14331 1867 1898 32 Partial
ISH10 IS66 ISBst12 + 16131 17714 1584 - - - - -
Partial IS200/IS605 . - - - - 21456 20533 - - 924 Partial
Partial IS630 . + - - - 23336 23890 - - 555 Partial
ISH1 IS5 ISH1 - 31260 30142 1119 - - - - .
Partial IS200/IS605 . - - - - 35931 34651 - - 1281 Partial
ISH12 IS200/IS605 . + 36125 38023 1899 - - - - -
ISH3C ISH3 . - 47069 45679 1391 - - - - We have corrected the translation, this ORF is the Real Transposase
ISH8D IS4 ISH8 - 48587 47186 1402 - - - - .
ISH10B IS66 ISBst12 - 52184 50556 1629 - - - - .
ISH8B IS4 ISH8 + 56172 57574 1403 - - - - -
ISH9 IS5 . + 68504 68683 180 - - - - MITE: IRL(68504(1)-68520(17)) and IRR(68664(919)-68683(938))MITE
ISH3B ISH3 . - 97223 95826 1398 - - - - .
ISH3C ISH3 . + 99327 100717 1391 - - - - We have corrected the translation, this ORF is the Real Transposase
ISH2 IS4 ISH8 - 177455 176935 521 - - - - .
ISH11 IS5 . + 178275 179342 1068 - - - - -
ISH22 IS200/IS605 . + 228924 230649 1726 - - - - -
ISH8B IS4 ISH8 - 266984 265582 1403 - - - - .
ISH12 IS200/IS605 . + - - - 453628 453662 1865 1899 35 Partial
ISH4 IS1595 . - 698030 697027 1004 - - - - .
ISH2 IS4 ISH8 + 759509 760029 521 - - - - -
ISH2 IS4 ISH8 + 771564 772084 521 - - - - -
ISH6 ISNCY ISH6 - 812580 811133 1448 - - - - .
ISH11 IS5 . + 1184713 1185780 1068 - - - - Error in author coordinates for the ORF, it is 1184755-1185759 instead of 1184767-1185759.
ISH3C ISH3 . - 1187861 1186471 1391 - - - - We have corrected the translation, this ORF is the Real Transposase
ISH2 IS4 ISH8 - 1230858 1230338 521 - - - - .
ISH8E IS4 ISH8 + 1231046 1232448 1403 - - - - -
ISH8B IS4 ISH8 + 1608078 1609480 1403 - - - - -
Partial IS200/IS605 . - - - - 1989215 1987884 - - 1332 Partial
ISH3C ISH3 . - 2005605 2004215 1391 - - - - We have corrected the translation, this ORF is the Real Transposase


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