ISAhy2
- Family IS630
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FM877486 | ND | Aeromonas hydrophila | Aeromonas media WS Aeromonas sp. GK7 Aeromonas hydrophila F181 Aeromonas punctata HGB5 plasmid pFBAOT6 Aeromonas caviae HGB5 plasmid pFBAOT6 |
DNA section
IS Length : 1158 bp
Ends
IR Length : 16/19
IRL : AATAGCTGTTCCGAATAGTAGATAACCGGAGGAAGGGAACTCAGTCCAGT
IRR : AATAACTGATCCCAATAGTGCTACACCTTCGCTGTGCCATAGCCATTCCC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TTTTGGCCTC | TA | GCCCTTGCGT | 2 |
CGCTGAGGTC | TA | GGCTATGGAG | 2 |
DNA sequence
AATAGCTGTTCCGAATAGTAGATAACCGGAGGAAGGGAACTCAGTCCAGTTTGTGCGATCTGATTAGTCGCTAAACAAAACAAGCCACAGCCAAAGGACT
GAGTTGATGCCTATCCTACCACCTCTGCCACGACCACAACGGCGCCGCATTCACAAAATCATCCATGCCACCCGTGATAAAGGACATGCTCGTCGCTTGA
TGGCCATCTTGCTGTTACATGAAGGACGCACGATCACCGATGTTCATCACCTTACCGGCGCTGCGCGCTCGACCATCGGTCGTTGGCTTCGGTGGTATCG
AGATGAAGGCATAGATGCGCTAGAAGCCTTACCGGCTGGCCGTGCCCCAGTCTTACCTATCGCCAAGATTGTCACCTTACTGGTGCTGCTCATGCAGTTT
TCTCCGCAAGATTTTGGTTATCAGCGCAGCCGTTGGTGTACTGAACTATTGGCTATAAAAATCAATCGGTTAACAGGGCTCAATGAGGCAGCCTCCACGC
TCCGCCGATGGTTACCTCGTATGGGCATTGTCTGGCGCAGGCCCGTGCCGACCTTGCGGATAAAAGACCCAGCCTATCAGGAAAAAATGGCGAATATCGA
CGCCGCGCTGGCCCGCTGTGATGCCGATAATCCGGTGTTTTATGAGGATGAAGTCGATATAGACCTCAATCCCAAATTAGGAGCCGACTGGATGTTCAGA
GCGCAGCAAAAGCGGGTTGTCACACCGGGGCAGAATGCCAAGCATTATCTGGCAGGCGTTCTCCACGCAGGCAACGGAAGGGTACTTTACGTCAGCGGGA
TCAAGAAAAACTCATCGCTGTTTATTGCCATGCTGGAAAAGCTGCGCCACCACTACCGACGAGCCAAAACCATCGCGTTGATCCTCGATAACTACATCAT
TCACAAAAGCAAACAGACCGAGCGATGGTTGAAGAAGAATCCCAAGTTCTGCCTGGTGTTCCAGCCAGTTTACAGCCCTTGGGTTAATCACATAGAACGG
CTATGGCACAAGTTACATGAAACCATCACGCGCAATCATCAATGCAGAGGGATGGCAAACCTGCTGGCCCGAGTGAAACACTTCATGGATACCGTGTCTC
CTTTCCCGGGGAATGGCTATGGCACAGCGAAGGTGTAGCACTATTGGGATCAGTTATT
GAGTTGATGCCTATCCTACCACCTCTGCCACGACCACAACGGCGCCGCATTCACAAAATCATCCATGCCACCCGTGATAAAGGACATGCTCGTCGCTTGA
TGGCCATCTTGCTGTTACATGAAGGACGCACGATCACCGATGTTCATCACCTTACCGGCGCTGCGCGCTCGACCATCGGTCGTTGGCTTCGGTGGTATCG
AGATGAAGGCATAGATGCGCTAGAAGCCTTACCGGCTGGCCGTGCCCCAGTCTTACCTATCGCCAAGATTGTCACCTTACTGGTGCTGCTCATGCAGTTT
TCTCCGCAAGATTTTGGTTATCAGCGCAGCCGTTGGTGTACTGAACTATTGGCTATAAAAATCAATCGGTTAACAGGGCTCAATGAGGCAGCCTCCACGC
TCCGCCGATGGTTACCTCGTATGGGCATTGTCTGGCGCAGGCCCGTGCCGACCTTGCGGATAAAAGACCCAGCCTATCAGGAAAAAATGGCGAATATCGA
CGCCGCGCTGGCCCGCTGTGATGCCGATAATCCGGTGTTTTATGAGGATGAAGTCGATATAGACCTCAATCCCAAATTAGGAGCCGACTGGATGTTCAGA
GCGCAGCAAAAGCGGGTTGTCACACCGGGGCAGAATGCCAAGCATTATCTGGCAGGCGTTCTCCACGCAGGCAACGGAAGGGTACTTTACGTCAGCGGGA
TCAAGAAAAACTCATCGCTGTTTATTGCCATGCTGGAAAAGCTGCGCCACCACTACCGACGAGCCAAAACCATCGCGTTGATCCTCGATAACTACATCAT
TCACAAAAGCAAACAGACCGAGCGATGGTTGAAGAAGAATCCCAAGTTCTGCCTGGTGTTCCAGCCAGTTTACAGCCCTTGGGTTAATCACATAGAACGG
CTATGGCACAAGTTACATGAAACCATCACGCGCAATCATCAATGCAGAGGGATGGCAAACCTGCTGGCCCGAGTGAAACACTTCATGGATACCGTGTCTC
CTTTCCCGGGGAATGGCTATGGCACAGCGAAGGTGTAGCACTATTGGGATCAGTTATT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1032 bp | 343 aa | 107 | 1138 | + | No |
Chemistry : DDE
ORF sequence :
MPILPPLPRPQRRRIHKIIHATRDKGHARRLMAILLLHEGRTITDVHHLTGAARSTIGRWLRWYRDEGIDALEALPAGRAPVLPIAKIVTLLVLLMQFSP
QDFGYQRSRWCTELLAIKINRLTGLNEAASTLRRWLPRMGIVWRRPVPTLRIKDPAYQEKMANIDAALARCDADNPVFYEDEVDIDLNPKLGADWMFRAQ
QKRVVTPGQNAKHYLAGVLHAGNGRVLYVSGIKKNSSLFIAMLEKLRHHYRRAKTIALILDNYIIHKSKQTERWLKKNPKFCLVFQPVYSPWVNHIERLW
HKLHETITRNHQCRGMANLLARVKHFMDTVSPFPGNGYGTAKV
QDFGYQRSRWCTELLAIKINRLTGLNEAASTLRRWLPRMGIVWRRPVPTLRIKDPAYQEKMANIDAALARCDADNPVFYEDEVDIDLNPKLGADWMFRAQ
QKRVVTPGQNAKHYLAGVLHAGNGRVLYVSGIKKNSSLFIAMLEKLRHHYRRAKTIALILDNYIIHKSKQTERWLKKNPKFCLVFQPVYSPWVNHIERLW
HKLHETITRNHQCRGMANLLARVKHFMDTVSPFPGNGYGTAKV
Blast result :
Comments
ISAhy2 is 76% aa similar to ISSod16.
This IS disrupts a coding sequence itself located within a gene cassette of a class 1 integron
This IS disrupts a coding sequence itself located within a gene cassette of a class 1 integron
References
1] Thomas Jové (2014) Direct submission
2] Kadlec,K., von Czapiewski,E., Kaspar,H., Steinacker,U., Wallmann,J. and Schwarz,S. (2008) Direct submission GenBank.
2] Kadlec,K., von Czapiewski,E., Kaspar,H., Steinacker,U., Wallmann,J. and Schwarz,S. (2008) Direct submission GenBank.