ISAeca5

  • Family IS1595
  • Group IS1595
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
LIIX01000004 ND Aeromonas caviae
Aeromonas caviae 429865 Ae_04
DNA section
IS Length : 1022 bp

Ends


IR Length : 20/25

IRL : CCTGATTACCCATGATTAGCAGTCACCACGAGCTATACTGATCTTACGTA
IRR : CCTGATTACCCATGACCCTCAGCCAGCTTCAAGAGCCGATATGGCATCGG

Insertion site


Left flankDirect repeatRight flankDR Length
TGGAAGGGTATAACATTTTGATATTTGA8

DNA sequence

CCTGATTACCCATGATTAGCAGTCACCACGAGCTATACTGATCTTACGTACAGTTACTGAGGTGCGAGATCATGGCCAAAAGCAAAGTCCAATTCCAGAA
AGGCTACAGCCTGTTTGATTTTTTCAAGGACTATGGCACTGAAGCGCAGTGCGAAAACGCGCTGCTCGCTTGGCGTTTTCCGAACGGTTTCATCTGTCCT
GAGTGCGCCAACAAGACCTGCTGTCGCCTGAAAAGTCGGCCACGCGTGCTGCAATGCAATAACTGCCGTCACCAGATGTCATTGACTGGAAACACGATTT
TTGCAAACACCAAACTCCCACTGACCAAGTGGTTTCTGGCGATGCACCTGCTGTCACAGACCAAAACTGGCTTGTCAGCGATGGAGCTAAAGCGCCAGTT
GGACGTCAAATATGACACCGCCTGGATGCTCAAGCACAAGCTGCTGCAAGCCATGAAAGAGTCCGATGACAAGCAGCCCATCAGCGGCATCATTCAGCTC
GATGATGTCTACTGGGGTGGAGAGCGCCGTGGTGGTAAACGAGGTCGCGGCGCGGCAGGCAAGACGCCGTTTGTGGCAGCAGTAGCCCTGAACAAGGAAG
GGCATCCAATCAAGATGCGGATGACGGTGGTCGATGGTTTCAAAACCAACGTCATTGCTGATTGGGCAAAACGGCATCTTGCTAGTGGTAGCGCGGTGAT
ATCCGATGGATTGGCCTGTTTCAAAGCGGTCAAGGAGGCCAATTGTGAGCACCTGGGTGTTGTCACCGGGGGCAACCTTGATTTGCTGGATCATCCGGCA
TTCAACTGGGTAAACACGATGATAGGGAATGTGAAGAACTCGCTGCGGGGCAGTTGTCATAAGCTCGGAGCGAAGCATTTACCAAGGCATCTTGCTGAAT
ACTGCTTCCGGTTTAATCATCGTTTTGACCTCAAGAGTATGTTTGTTGAATTGGGGCATGCAGTCGTGGCAAGCCCGCCGATGCCATATCGGCTCTTGAA
GCTGGCTGAGGGTCATGGGTAATCAGG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
951 bp316 aa721022+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAKSKVQFQKGYSLFDFFKDYGTEAQCENALLAWRFPNGFICPECANKTCCRLKSRPRVLQCNNCRHQMSLTGNTIFANTKLPLTKWFLAMHLLSQTKTG
LSAMELKRQLDVKYDTAWMLKHKLLQAMKESDDKQPISGIIQLDDVYWGGERRGGKRGRGAAGKTPFVAAVALNKEGHPIKMRMTVVDGFKTNVIADWAK
RHLASGSAVISDGLACFKAVKEANCEHLGVVTGGNLDLLDHPAFNWVNTMIGNVKNSLRGSCHKLGAKHLPRHLAEYCFRFNHRFDLKSMFVELGHAVVA
SPPMPYRLLKLAEGHG

 

Blast result :
Comments
ISAeca5 is 95% aa similar to ISKpn3.
References
1] Thomas Jové (2015) Direct submission
2] Padilla,J.C., Bustos,P., Castro-Escarpulli,G., Sanchez-Varela,A., Palma-Martinez,I., Arzate-Barbosa,P., Garcia-Perez,C.A., Lopez-Lopez Mde,J., Gonzalez,V. and Guo,X. (2015) Genome Announc 3 (5), e01240-15