ISAeca5
- Family IS1595
- Group IS1595
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
LIIX01000004 | ND | Aeromonas caviae | Aeromonas caviae 429865 Ae_04 |
DNA section
IS Length : 1022 bp
Ends
IR Length : 20/25
IRL : CCTGATTACCCATGATTAGCAGTCACCACGAGCTATACTGATCTTACGTA
IRR : CCTGATTACCCATGACCCTCAGCCAGCTTCAAGAGCCGATATGGCATCGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TGGAAGGGTA | TAACATTT | TGATATTTGA | 8 |
DNA sequence
CCTGATTACCCATGATTAGCAGTCACCACGAGCTATACTGATCTTACGTACAGTTACTGAGGTGCGAGATCATGGCCAAAAGCAAAGTCCAATTCCAGAA
AGGCTACAGCCTGTTTGATTTTTTCAAGGACTATGGCACTGAAGCGCAGTGCGAAAACGCGCTGCTCGCTTGGCGTTTTCCGAACGGTTTCATCTGTCCT
GAGTGCGCCAACAAGACCTGCTGTCGCCTGAAAAGTCGGCCACGCGTGCTGCAATGCAATAACTGCCGTCACCAGATGTCATTGACTGGAAACACGATTT
TTGCAAACACCAAACTCCCACTGACCAAGTGGTTTCTGGCGATGCACCTGCTGTCACAGACCAAAACTGGCTTGTCAGCGATGGAGCTAAAGCGCCAGTT
GGACGTCAAATATGACACCGCCTGGATGCTCAAGCACAAGCTGCTGCAAGCCATGAAAGAGTCCGATGACAAGCAGCCCATCAGCGGCATCATTCAGCTC
GATGATGTCTACTGGGGTGGAGAGCGCCGTGGTGGTAAACGAGGTCGCGGCGCGGCAGGCAAGACGCCGTTTGTGGCAGCAGTAGCCCTGAACAAGGAAG
GGCATCCAATCAAGATGCGGATGACGGTGGTCGATGGTTTCAAAACCAACGTCATTGCTGATTGGGCAAAACGGCATCTTGCTAGTGGTAGCGCGGTGAT
ATCCGATGGATTGGCCTGTTTCAAAGCGGTCAAGGAGGCCAATTGTGAGCACCTGGGTGTTGTCACCGGGGGCAACCTTGATTTGCTGGATCATCCGGCA
TTCAACTGGGTAAACACGATGATAGGGAATGTGAAGAACTCGCTGCGGGGCAGTTGTCATAAGCTCGGAGCGAAGCATTTACCAAGGCATCTTGCTGAAT
ACTGCTTCCGGTTTAATCATCGTTTTGACCTCAAGAGTATGTTTGTTGAATTGGGGCATGCAGTCGTGGCAAGCCCGCCGATGCCATATCGGCTCTTGAA
GCTGGCTGAGGGTCATGGGTAATCAGG
AGGCTACAGCCTGTTTGATTTTTTCAAGGACTATGGCACTGAAGCGCAGTGCGAAAACGCGCTGCTCGCTTGGCGTTTTCCGAACGGTTTCATCTGTCCT
GAGTGCGCCAACAAGACCTGCTGTCGCCTGAAAAGTCGGCCACGCGTGCTGCAATGCAATAACTGCCGTCACCAGATGTCATTGACTGGAAACACGATTT
TTGCAAACACCAAACTCCCACTGACCAAGTGGTTTCTGGCGATGCACCTGCTGTCACAGACCAAAACTGGCTTGTCAGCGATGGAGCTAAAGCGCCAGTT
GGACGTCAAATATGACACCGCCTGGATGCTCAAGCACAAGCTGCTGCAAGCCATGAAAGAGTCCGATGACAAGCAGCCCATCAGCGGCATCATTCAGCTC
GATGATGTCTACTGGGGTGGAGAGCGCCGTGGTGGTAAACGAGGTCGCGGCGCGGCAGGCAAGACGCCGTTTGTGGCAGCAGTAGCCCTGAACAAGGAAG
GGCATCCAATCAAGATGCGGATGACGGTGGTCGATGGTTTCAAAACCAACGTCATTGCTGATTGGGCAAAACGGCATCTTGCTAGTGGTAGCGCGGTGAT
ATCCGATGGATTGGCCTGTTTCAAAGCGGTCAAGGAGGCCAATTGTGAGCACCTGGGTGTTGTCACCGGGGGCAACCTTGATTTGCTGGATCATCCGGCA
TTCAACTGGGTAAACACGATGATAGGGAATGTGAAGAACTCGCTGCGGGGCAGTTGTCATAAGCTCGGAGCGAAGCATTTACCAAGGCATCTTGCTGAAT
ACTGCTTCCGGTTTAATCATCGTTTTGACCTCAAGAGTATGTTTGTTGAATTGGGGCATGCAGTCGTGGCAAGCCCGCCGATGCCATATCGGCTCTTGAA
GCTGGCTGAGGGTCATGGGTAATCAGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
951 bp | 316 aa | 72 | 1022 | + | No |
Chemistry : DDE
ORF sequence :
MAKSKVQFQKGYSLFDFFKDYGTEAQCENALLAWRFPNGFICPECANKTCCRLKSRPRVLQCNNCRHQMSLTGNTIFANTKLPLTKWFLAMHLLSQTKTG
LSAMELKRQLDVKYDTAWMLKHKLLQAMKESDDKQPISGIIQLDDVYWGGERRGGKRGRGAAGKTPFVAAVALNKEGHPIKMRMTVVDGFKTNVIADWAK
RHLASGSAVISDGLACFKAVKEANCEHLGVVTGGNLDLLDHPAFNWVNTMIGNVKNSLRGSCHKLGAKHLPRHLAEYCFRFNHRFDLKSMFVELGHAVVA
SPPMPYRLLKLAEGHG
LSAMELKRQLDVKYDTAWMLKHKLLQAMKESDDKQPISGIIQLDDVYWGGERRGGKRGRGAAGKTPFVAAVALNKEGHPIKMRMTVVDGFKTNVIADWAK
RHLASGSAVISDGLACFKAVKEANCEHLGVVTGGNLDLLDHPAFNWVNTMIGNVKNSLRGSCHKLGAKHLPRHLAEYCFRFNHRFDLKSMFVELGHAVVA
SPPMPYRLLKLAEGHG
Blast result :
Comments
ISAeca5 is 95% aa similar to ISKpn3.
References
1] Thomas Jové (2015) Direct submission
2] Padilla,J.C., Bustos,P., Castro-Escarpulli,G., Sanchez-Varela,A., Palma-Martinez,I., Arzate-Barbosa,P., Garcia-Perez,C.A., Lopez-Lopez Mde,J., Gonzalez,V. and Guo,X. (2015) Genome Announc 3 (5), e01240-15
2] Padilla,J.C., Bustos,P., Castro-Escarpulli,G., Sanchez-Varela,A., Palma-Martinez,I., Arzate-Barbosa,P., Garcia-Perez,C.A., Lopez-Lopez Mde,J., Gonzalez,V. and Guo,X. (2015) Genome Announc 3 (5), e01240-15