ISAan1
- Family IS1595
- Group ISSod11
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_JNJH01000195 | ND | Acidiphilium angustum | Acidiphilium angustum ATCC 35903 |
DNA section
IS Length : 1092 bp
Ends
IR Length : 30/32
IRL : CGTGCCTATCCGGTTGACTCAGACACCCACTAGGGCTAGTGGCCCCCGCC
IRR : CGTGCCTATCCGGTTAAGTCAGACACCCACTACATGTGGGGTGGACCCAT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
CGTGCCTATCCGGTTGACTCAGACACCCACTAGGGCTAGTGGCCCCCGCCATGGCGGCCATTGACATTCACCAGCGTGACGAACTGGCTTTCCCCCGATC
GCTCCCCGAATTTCAGAAGCTATTTCCTGACGACGCCGCGTGTGCCACCTACCTTGGGCGCGCCCGTTGGCCTCACGGTTTTGTCTGCCCGCATTGCGGC
GTGATTGGCGAGCCCTTCCGCATTACAACCCGCCCCGGCGTTCTGGAATGTCGCGCGTGTCGACGCCAAACCGGCCTCCTGGCTGGCACAGTGATGGAGC
GCAGTCACACGCCGCTCAGCGTTTGGTTCTGGGCCGCATATCTCGTCGCCAGCCAGACACCGGGCATGTCGGCGGTGCAGTTTCAGCGGCAACTTGGACT
GACACGATACGAAACCGCTTTCGCCATCCTGCACAAACTGCGCGCCGGCATGGTGAGGCCGGACCAGGACCGCATCGGCGGTCAGGCGAAAGAGCATGTC
GAGGTCGATGAAACGTGGGTAGGGGGAAGGACGCGCGGCGAGGGCCGGGGCATCCATCACAAGACATTGGTGTCCGCCGCTGTCGAGGTTCGTCATCGCA
AACCGGGGACAGCGCAAGACAAGCGGAGGGACGGTCGCTTTGCCGGTCGCGTGCGATTGGCCATCGTCGCAGACCGCAGCGCCGACTCCTTATGCGGCTT
TGTCGAGAACGCCGTCATGCCGGGCTCGCTGATCATCACCGACGATTGGAGCGGTTACGCCAGCCTACGCAAGCGGGGCTACGACCATCATCCAATTGCC
GAAAGCGGCGATCCCGAAATCGCCGAGCAGTTCATGCCGATAATCCACCTTGTCTTCTCCAATTTGAAGACCTGGCTCAACGGCATCCACCACGGCGTAA
GCGCCAAGCATCTACAAGCCTACCTCAATGAATTCACGTTCCGGTTCAACCGGCGCTTTTATCCGTTCAACGCCTTCCGCTCGTTGCTCGGCATCGCGGG
CGGCGCCGAGGCGCCAACCTATGCCCAGCTTTATTCGGGAGCATGGGTCCACCCCACATGTAGTGGGTGTCTGACTTAACCGGATAGGCACG
GCTCCCCGAATTTCAGAAGCTATTTCCTGACGACGCCGCGTGTGCCACCTACCTTGGGCGCGCCCGTTGGCCTCACGGTTTTGTCTGCCCGCATTGCGGC
GTGATTGGCGAGCCCTTCCGCATTACAACCCGCCCCGGCGTTCTGGAATGTCGCGCGTGTCGACGCCAAACCGGCCTCCTGGCTGGCACAGTGATGGAGC
GCAGTCACACGCCGCTCAGCGTTTGGTTCTGGGCCGCATATCTCGTCGCCAGCCAGACACCGGGCATGTCGGCGGTGCAGTTTCAGCGGCAACTTGGACT
GACACGATACGAAACCGCTTTCGCCATCCTGCACAAACTGCGCGCCGGCATGGTGAGGCCGGACCAGGACCGCATCGGCGGTCAGGCGAAAGAGCATGTC
GAGGTCGATGAAACGTGGGTAGGGGGAAGGACGCGCGGCGAGGGCCGGGGCATCCATCACAAGACATTGGTGTCCGCCGCTGTCGAGGTTCGTCATCGCA
AACCGGGGACAGCGCAAGACAAGCGGAGGGACGGTCGCTTTGCCGGTCGCGTGCGATTGGCCATCGTCGCAGACCGCAGCGCCGACTCCTTATGCGGCTT
TGTCGAGAACGCCGTCATGCCGGGCTCGCTGATCATCACCGACGATTGGAGCGGTTACGCCAGCCTACGCAAGCGGGGCTACGACCATCATCCAATTGCC
GAAAGCGGCGATCCCGAAATCGCCGAGCAGTTCATGCCGATAATCCACCTTGTCTTCTCCAATTTGAAGACCTGGCTCAACGGCATCCACCACGGCGTAA
GCGCCAAGCATCTACAAGCCTACCTCAATGAATTCACGTTCCGGTTCAACCGGCGCTTTTATCCGTTCAACGCCTTCCGCTCGTTGCTCGGCATCGCGGG
CGGCGCCGAGGCGCCAACCTATGCCCAGCTTTATTCGGGAGCATGGGTCCACCCCACATGTAGTGGGTGTCTGACTTAACCGGATAGGCACG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1029 bp | 342 aa | 51 | 1079 | + | No |
Chemistry : DDE
ORF sequence :
MAAIDIHQRDELAFPRSLPEFQKLFPDDAACATYLGRARWPHGFVCPHCGVIGEPFRITTRPGVLECRACRRQTGLLAGTVMERSHTPLSVWFWAAYLVA
SQTPGMSAVQFQRQLGLTRYETAFAILHKLRAGMVRPDQDRIGGQAKEHVEVDETWVGGRTRGEGRGIHHKTLVSAAVEVRHRKPGTAQDKRRDGRFAGR
VRLAIVADRSADSLCGFVENAVMPGSLIITDDWSGYASLRKRGYDHHPIAESGDPEIAEQFMPIIHLVFSNLKTWLNGIHHGVSAKHLQAYLNEFTFRFN
RRFYPFNAFRSLLGIAGGAEAPTYAQLYSGAWVHPTCSGCLT
SQTPGMSAVQFQRQLGLTRYETAFAILHKLRAGMVRPDQDRIGGQAKEHVEVDETWVGGRTRGEGRGIHHKTLVSAAVEVRHRKPGTAQDKRRDGRFAGR
VRLAIVADRSADSLCGFVENAVMPGSLIITDDWSGYASLRKRGYDHHPIAESGDPEIAEQFMPIIHLVFSNLKTWLNGIHHGVSAKHLQAYLNEFTFRFN
RRFYPFNAFRSLLGIAGGAEAPTYAQLYSGAWVHPTCSGCLT
Blast result :
Comments
ISAan1 is 88% aa similar to ISApr3.
References
1] Thomas Jové (2016) Direct submission.
2] Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T. (2014) Direct GenBank submission.
2] Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T. (2014) Direct GenBank submission.