ISAan1

  • Family IS1595
  • Group ISSod11
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_JNJH01000195 ND Acidiphilium angustum
Acidiphilium angustum ATCC 35903
DNA section
IS Length : 1092 bp

Ends


IR Length : 30/32

IRL : CGTGCCTATCCGGTTGACTCAGACACCCACTAGGGCTAGTGGCCCCCGCC
IRR : CGTGCCTATCCGGTTAAGTCAGACACCCACTACATGTGGGGTGGACCCAT

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

CGTGCCTATCCGGTTGACTCAGACACCCACTAGGGCTAGTGGCCCCCGCCATGGCGGCCATTGACATTCACCAGCGTGACGAACTGGCTTTCCCCCGATC
GCTCCCCGAATTTCAGAAGCTATTTCCTGACGACGCCGCGTGTGCCACCTACCTTGGGCGCGCCCGTTGGCCTCACGGTTTTGTCTGCCCGCATTGCGGC
GTGATTGGCGAGCCCTTCCGCATTACAACCCGCCCCGGCGTTCTGGAATGTCGCGCGTGTCGACGCCAAACCGGCCTCCTGGCTGGCACAGTGATGGAGC
GCAGTCACACGCCGCTCAGCGTTTGGTTCTGGGCCGCATATCTCGTCGCCAGCCAGACACCGGGCATGTCGGCGGTGCAGTTTCAGCGGCAACTTGGACT
GACACGATACGAAACCGCTTTCGCCATCCTGCACAAACTGCGCGCCGGCATGGTGAGGCCGGACCAGGACCGCATCGGCGGTCAGGCGAAAGAGCATGTC
GAGGTCGATGAAACGTGGGTAGGGGGAAGGACGCGCGGCGAGGGCCGGGGCATCCATCACAAGACATTGGTGTCCGCCGCTGTCGAGGTTCGTCATCGCA
AACCGGGGACAGCGCAAGACAAGCGGAGGGACGGTCGCTTTGCCGGTCGCGTGCGATTGGCCATCGTCGCAGACCGCAGCGCCGACTCCTTATGCGGCTT
TGTCGAGAACGCCGTCATGCCGGGCTCGCTGATCATCACCGACGATTGGAGCGGTTACGCCAGCCTACGCAAGCGGGGCTACGACCATCATCCAATTGCC
GAAAGCGGCGATCCCGAAATCGCCGAGCAGTTCATGCCGATAATCCACCTTGTCTTCTCCAATTTGAAGACCTGGCTCAACGGCATCCACCACGGCGTAA
GCGCCAAGCATCTACAAGCCTACCTCAATGAATTCACGTTCCGGTTCAACCGGCGCTTTTATCCGTTCAACGCCTTCCGCTCGTTGCTCGGCATCGCGGG
CGGCGCCGAGGCGCCAACCTATGCCCAGCTTTATTCGGGAGCATGGGTCCACCCCACATGTAGTGGGTGTCTGACTTAACCGGATAGGCACG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1029 bp342 aa511079+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAAIDIHQRDELAFPRSLPEFQKLFPDDAACATYLGRARWPHGFVCPHCGVIGEPFRITTRPGVLECRACRRQTGLLAGTVMERSHTPLSVWFWAAYLVA
SQTPGMSAVQFQRQLGLTRYETAFAILHKLRAGMVRPDQDRIGGQAKEHVEVDETWVGGRTRGEGRGIHHKTLVSAAVEVRHRKPGTAQDKRRDGRFAGR
VRLAIVADRSADSLCGFVENAVMPGSLIITDDWSGYASLRKRGYDHHPIAESGDPEIAEQFMPIIHLVFSNLKTWLNGIHHGVSAKHLQAYLNEFTFRFN
RRFYPFNAFRSLLGIAGGAEAPTYAQLYSGAWVHPTCSGCLT

 

Blast result :
Comments
ISAan1 is 88% aa similar to ISApr3.
References
1] Thomas Jové (2016) Direct submission.
2] Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T. (2014) Direct GenBank submission.