ISAisp8
- Family IS1595
- Group ISSod11
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AGTS01000063 | ND | Acidovorax sp. | Acidovorax sp. NO-1 |
DNA section
IS Length : 1091 bp
Ends
IR Length : 23
IRL : AAGGGGTATCCACTTAGCTCCAGCAGATGCAGAATAACTGGATGGATATC
IRR : AAGGGGTATCCACTTAGCTCCAGTCATCGTAAATGCTGGATGGATAACCA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
tctatactgt | tgttatgt | ccagtattgt | 8 |
DNA sequence
AAGGGGTATCCACTTAGCTCCAGCAGATGCAGAATAACTGGATGGATATCCATACTTTAGCGCCAACGCCCGGAAAAGACTATCCGCAGACTTGGAACGA
GTTTCTTGACTGGTTTGCCACCGAAGAGGCGTGCCTTGCCTATCTGGAGCGGCTGCGGTGGTCCCAAGGTTTTGTCTGCCCGCGCTGCGGCTGCGTAGGC
GATGCCTATCGTGCGACGCGTACCCGGCTGATGTGCCCGAGTTGCCAACACCAGAGTTCGGTGACCGCCGGCACCATCTTCGAGAAGACCCGAACGCCAC
TGCGCGTTTGGCTGGCTGCGGCTTGGTACCTGACCAATCAGAAGCAAGGCGTGAGCGCGTTGGGTCTACAGCGCGTGCTGGGACTGGGCAGCTATCAGAC
CGCTTGGACCATGCTGCATCGGCTTCGTCGTGCCATGGTTCGACCGGGTCGCGAACAGCTCAAAGGGTTGGTCGAAGTTGACGAGACCTATCTGGCCATC
ACAGACAGGCGAAACCCCATCTCACCCAAAGGGCGCAAGAGCAGCACGAGCAAGGTGCTGGTGGTCATGGCCGTGGAGATGCTGGACCCCAAAGGATTCG
GCCGCATCCGCCTGCGCCGCATTGCCAATGACTCCGCTGCTTGTGTGATTCCGTTCGTGGAGGAGGTTATCGAGCCTGGCGCACAGGTGCGTACCGACGG
CTCGGCTGCCTACCTGACATTGAAAGACCTGGGCTTCGTCCATCAGCGCACGGTCATGTTGGGCTCCAACGTTCCGGCTCATGTCTCGATGGCTGGCGTG
CATCGGGTGGCGGCTCTGGTGCAGCGCTGGATTCTGGGCACACACCATGGCTCGGTGCAGCCCGAACACCTGGATGCCTACCTGGATGAGTTCGTGTTCC
GCTTCAATCGCCGCACATCCAACTCACGCGGCATGTTGTTCTATCGGTTGCTGCAACAAGCGGTCGTGACAGCACCGGTGACGTACCGGGACGTGGTGAA
AAAGGCTTGACTGTTTGCCTGACTGGCATACCATTCAATACTGGTTATCCATCCAGCATTTACGATGACTGGAGCTAAGTGGATACCCCTT
GTTTCTTGACTGGTTTGCCACCGAAGAGGCGTGCCTTGCCTATCTGGAGCGGCTGCGGTGGTCCCAAGGTTTTGTCTGCCCGCGCTGCGGCTGCGTAGGC
GATGCCTATCGTGCGACGCGTACCCGGCTGATGTGCCCGAGTTGCCAACACCAGAGTTCGGTGACCGCCGGCACCATCTTCGAGAAGACCCGAACGCCAC
TGCGCGTTTGGCTGGCTGCGGCTTGGTACCTGACCAATCAGAAGCAAGGCGTGAGCGCGTTGGGTCTACAGCGCGTGCTGGGACTGGGCAGCTATCAGAC
CGCTTGGACCATGCTGCATCGGCTTCGTCGTGCCATGGTTCGACCGGGTCGCGAACAGCTCAAAGGGTTGGTCGAAGTTGACGAGACCTATCTGGCCATC
ACAGACAGGCGAAACCCCATCTCACCCAAAGGGCGCAAGAGCAGCACGAGCAAGGTGCTGGTGGTCATGGCCGTGGAGATGCTGGACCCCAAAGGATTCG
GCCGCATCCGCCTGCGCCGCATTGCCAATGACTCCGCTGCTTGTGTGATTCCGTTCGTGGAGGAGGTTATCGAGCCTGGCGCACAGGTGCGTACCGACGG
CTCGGCTGCCTACCTGACATTGAAAGACCTGGGCTTCGTCCATCAGCGCACGGTCATGTTGGGCTCCAACGTTCCGGCTCATGTCTCGATGGCTGGCGTG
CATCGGGTGGCGGCTCTGGTGCAGCGCTGGATTCTGGGCACACACCATGGCTCGGTGCAGCCCGAACACCTGGATGCCTACCTGGATGAGTTCGTGTTCC
GCTTCAATCGCCGCACATCCAACTCACGCGGCATGTTGTTCTATCGGTTGCTGCAACAAGCGGTCGTGACAGCACCGGTGACGTACCGGGACGTGGTGAA
AAAGGCTTGACTGTTTGCCTGACTGGCATACCATTCAATACTGGTTATCCATCCAGCATTTACGATGACTGGAGCTAAGTGGATACCCCTT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
984 bp | 327 aa | 27 | 1010 | + | No |
Chemistry : DDE
ORF sequence :
MQNNWMDIHTLAPTPGKDYPQTWNEFLDWFATEEACLAYLERLRWSQGFVCPRCGCVGDAYRATRTRLMCPSCQHQSSVTAGTIFEKTRTPLRVWLAAAW
YLTNQKQGVSALGLQRVLGLGSYQTAWTMLHRLRRAMVRPGREQLKGLVEVDETYLAITDRRNPISPKGRKSSTSKVLVVMAVEMLDPKGFGRIRLRRIA
NDSAACVIPFVEEVIEPGAQVRTDGSAAYLTLKDLGFVHQRTVMLGSNVPAHVSMAGVHRVAALVQRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSNS
RGMLFYRLLQQAVVTAPVTYRDVVKKA
YLTNQKQGVSALGLQRVLGLGSYQTAWTMLHRLRRAMVRPGREQLKGLVEVDETYLAITDRRNPISPKGRKSSTSKVLVVMAVEMLDPKGFGRIRLRRIA
NDSAACVIPFVEEVIEPGAQVRTDGSAAYLTLKDLGFVHQRTVMLGSNVPAHVSMAGVHRVAALVQRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSNS
RGMLFYRLLQQAVVTAPVTYRDVVKKA
Blast result :
Comments
ISAisp8 is 93% aa similar to ISVapa1.
References
1] Thomas Jové (2016) Direct submission.
2] Huang,Y., Li,H., Rensing,C., Zhao,K., Johnstone,L. and Wang,G. (2012) J. Bacteriol. 194 (6), 1635-1636.
2] Huang,Y., Li,H., Rensing,C., Zhao,K., Johnstone,L. and Wang,G. (2012) J. Bacteriol. 194 (6), 1635-1636.