ISAisp8

  • Family IS1595
  • Group ISSod11
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_AGTS01000063 ND Acidovorax sp.
Acidovorax sp. NO-1
DNA section
IS Length : 1091 bp

Ends


IR Length : 23

IRL : AAGGGGTATCCACTTAGCTCCAGCAGATGCAGAATAACTGGATGGATATC
IRR : AAGGGGTATCCACTTAGCTCCAGTCATCGTAAATGCTGGATGGATAACCA

Insertion site


Left flankDirect repeatRight flankDR Length
tctatactgttgttatgtccagtattgt8

DNA sequence

AAGGGGTATCCACTTAGCTCCAGCAGATGCAGAATAACTGGATGGATATCCATACTTTAGCGCCAACGCCCGGAAAAGACTATCCGCAGACTTGGAACGA
GTTTCTTGACTGGTTTGCCACCGAAGAGGCGTGCCTTGCCTATCTGGAGCGGCTGCGGTGGTCCCAAGGTTTTGTCTGCCCGCGCTGCGGCTGCGTAGGC
GATGCCTATCGTGCGACGCGTACCCGGCTGATGTGCCCGAGTTGCCAACACCAGAGTTCGGTGACCGCCGGCACCATCTTCGAGAAGACCCGAACGCCAC
TGCGCGTTTGGCTGGCTGCGGCTTGGTACCTGACCAATCAGAAGCAAGGCGTGAGCGCGTTGGGTCTACAGCGCGTGCTGGGACTGGGCAGCTATCAGAC
CGCTTGGACCATGCTGCATCGGCTTCGTCGTGCCATGGTTCGACCGGGTCGCGAACAGCTCAAAGGGTTGGTCGAAGTTGACGAGACCTATCTGGCCATC
ACAGACAGGCGAAACCCCATCTCACCCAAAGGGCGCAAGAGCAGCACGAGCAAGGTGCTGGTGGTCATGGCCGTGGAGATGCTGGACCCCAAAGGATTCG
GCCGCATCCGCCTGCGCCGCATTGCCAATGACTCCGCTGCTTGTGTGATTCCGTTCGTGGAGGAGGTTATCGAGCCTGGCGCACAGGTGCGTACCGACGG
CTCGGCTGCCTACCTGACATTGAAAGACCTGGGCTTCGTCCATCAGCGCACGGTCATGTTGGGCTCCAACGTTCCGGCTCATGTCTCGATGGCTGGCGTG
CATCGGGTGGCGGCTCTGGTGCAGCGCTGGATTCTGGGCACACACCATGGCTCGGTGCAGCCCGAACACCTGGATGCCTACCTGGATGAGTTCGTGTTCC
GCTTCAATCGCCGCACATCCAACTCACGCGGCATGTTGTTCTATCGGTTGCTGCAACAAGCGGTCGTGACAGCACCGGTGACGTACCGGGACGTGGTGAA
AAAGGCTTGACTGTTTGCCTGACTGGCATACCATTCAATACTGGTTATCCATCCAGCATTTACGATGACTGGAGCTAAGTGGATACCCCTT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
984 bp327 aa271010+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MQNNWMDIHTLAPTPGKDYPQTWNEFLDWFATEEACLAYLERLRWSQGFVCPRCGCVGDAYRATRTRLMCPSCQHQSSVTAGTIFEKTRTPLRVWLAAAW
YLTNQKQGVSALGLQRVLGLGSYQTAWTMLHRLRRAMVRPGREQLKGLVEVDETYLAITDRRNPISPKGRKSSTSKVLVVMAVEMLDPKGFGRIRLRRIA
NDSAACVIPFVEEVIEPGAQVRTDGSAAYLTLKDLGFVHQRTVMLGSNVPAHVSMAGVHRVAALVQRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSNS
RGMLFYRLLQQAVVTAPVTYRDVVKKA

 

Blast result :
Comments
ISAisp8 is 93% aa similar to ISVapa1.
References
1] Thomas Jové (2016) Direct submission.
2] Huang,Y., Li,H., Rensing,C., Zhao,K., Johnstone,L. and Wang,G. (2012) J. Bacteriol. 194 (6), 1635-1636.