ISAlw2

  • Family IS1
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Acinetobacter lwoffii
Acinetobacter lwoffii
Acinetobacter lwoffii M2a
DNA section
IS Length : 787 bp

Ends


IR Length : 24

IRL : GGTGGTGTTTCAAAAAGTATGCTGAAAAAAACAATATGGCTTTTGATAAA
IRR : GGTGGTGTTTCAAAAAGTATGCTGGCGTTAAACAAATCCGTTATTAAGGT

Comments : 24/24

Insertion site


Left flankDirect repeatRight flankDR Length
tttaagagtttaaaagactaagatattcttattcaggcgcttcatttt8
taagtttaatttgagatgaaaaaattatagttttttaaactacattccttagtctt0

DNA sequence

GGTGGTGTTTCAAAAAGTATGCTGAAAAAAACAATATGGCTTTTGATAAAATAGAGGTATGAAAATAACGCTACAAATCAAATGTCCTACCTGTCTAAGT
AACAATATAAAGAGAAATGGCATCAAAGTAGATGGGAAACAAAACCATCAATGCAAAGATTGCAAACGTCAGTTTATTGGTGATCATGCATTAAGCTATC
AAGGGTGTAACTCAGGTATTACCGGCAAGATATTACATTTAATGGTCAGAGGAAGCGGTGTAAGAGATATTGCTGAAGTCGAGCGTATCAGCATTGGCAA
GGTATTACGAACCTTAAGTGAATCGATCTATCAGATTCAGCCTAAACAAAGCCACTACGAATGTCTTGAAGTCGATGAACTTTGGACTTTTGTAGGGAAT
AAGCAAAATAAACAATGGCTTATTTATGCCTACCATCGAGAATCTGGAGAAATTGTTGCTTATGTTTGGGGTAAGCGGGATTTAGCAACGGTTCAACGTC
TTAAAGCTAGACTTAAAAAGCTTGGGGTTCAATATGCTCGAATTGCGAGTGATCATTGGGATAGTTTTATCACAGCATTTCAATGTTGCAAGCAAGTGAT
CGGTAAGTTTTTTACCGTCGGTATTGAAGGTAACAATTGTAGAATTCGTCATCGAATCAGGCGTGGATTTAGGAGAAGTTGCAACTTTTCTAAAAAGCTC
GAAAATCATTTTAAAGCCTTTGATTTGACTTTCTTTTACCTTAATAACGGATTTGTTTAACGCCAGCATACTTTTTGAAACACCACC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
702 bp233 aa59760+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKITLQIKCPTCLSNNIKRNGIKVDGKQNHQCKDCKRQFIGDHALSYQGCNSGITGKILHLMVRGSGVRDIAEVERISIGKVLRTLSESIYQIQPKQSHY
ECLEVDELWTFVGNKQNKQWLIYAYHRESGEIVAYVWGKRDLATVQRLKARLKKLGVQYARIASDHWDSFITAFQCCKQVIGKFFTVGIEGNNCRIRHRI
RRGFRRSCNFSKKLENHFKAFDLTFFYLNNGFV

 

Blast result :
Comments
ISAlw2 is 95% aa similar to ISPa14.
References
1] Janos Kiss (2019) Direct submission.