ISAlw8
- Family IS4
- Group IS50
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Acinetobacter lwoffii | Acinetobacter lwoffii Acinetobacter lwoffii M2a Acinetobacter lwoffii ZS207 |
DNA section
IS Length : 1370 bp
Ends
IR Length : 16
IRL : CATAGGTATCTACACAATTCCTGAACTTTGCGTTAAATTGAAGAGCATGC
IRR : CATAGGTATCTACACATCTATGAGATACCTAATGCCATTGTGGCTATCTC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GCTTCTCATCT | CCCAAAGGG | AGAGGGAGCAC | 9 |
DNA sequence
CATAGGTATCTACACAATTCCTGAACTTTGCGTTAAATTGAAGAGCATGCTCTTCAATTTAACATCTCTGGCCTGGATCAGCGTCTTGTCAAGCGCTATA
ACAGCCTTGTAAAGCTCAATATGAACCCTCTTGCTTCACTTGCTCCGGCAATCAAAGACCTGGCTTCTGCCCAAAAGTCGAGTTTCGCAACCACACAAGC
GGTCTGGCGATTCCTGAATAATGACAAAATCTCTTTTAGTCAGTTAAACCAGCCAATTGAACATCTTGCATGTGAACAGATCAAGGCATCACCGCATCAA
TATGCATTGATTGTTCATGACTGGTCTCAGCTACAGTATGTGAAACACCATCATAAAATTCAGCGCCTGCAAAGAACCCATCAATATGATTCAGGCTATG
AATTGCAAAGCAGTCTGCTGGTTGATGCAGCCTCGGGACTACCTATTGCGCCACTGGCGCAGACACTATCAGATGCCTCAGGCTGCTATTCCACATTCAG
TCAACACTCTGCTGGGCGCAAATCTCATCTAGATTCACTTACCGAACAAATCAAAGTGATTGAACAATATCCCATTGAGAAAACATGTGTTCATATCATT
GATCGTGAAGGTGACTCCATTGCCCACCTAAGGGAAATGAGCAGCCAGGGTTTTAAATGGCTGATTCGGGCGAAAGAAGGCCATCGAATTGAGCATCAGG
GCAAAACATGCAAAGTTGCAGAAGCCGCAGAACGAGTAGAAACGCAGCAGGTCCAGCCGATTGCCTATAAAGGAAACCGGCATATGTTGCATGTGGGAGA
AACTGCTATCCGGATAACACGTGCAGCAAAACCGAAGAGAAATGACGATTCAGGCCAACGGGTTGCTCCCCAGCCAGGGAGTGCGATTGAAGCCAGATTA
ATTGTTGCCGTAGTGAAAGATGATCAGGATAAGACCGTCGCAAGATGGTCACTAATCAGCAATGTTCCATCAGAGATTACTACGGTAGAGATGACGACCT
GGTATTACTGGCGCTGGACAATTGAATGCTATTTCAAGCTGCTCAAGCAGGCAGGTCATGATATTGAAGCATGGCTTCAGACCAGACCTGAAGCCATTTT
AAGGCGGTTACTGATTAGCTGTATGGCTTGTGTTTTAACTTGGCGAATCCAGCGTTCTGAAGATGAACACCATCAGAAAATTCGTGTATTTCTCACCCGT
CTTTCAGGTCGGCAGCAGAAAAGAGGTAGGTTGGAAAGTGCACCTGCCTTATTGGCAGGGCTTTCGATTTTACTGAACACTCTTCAACTGCTCTCGGAAT
ATTCAATAGATGAACTCAATGAGATAGCCACAATGGCATTAGGTATCTCATAGATGTGTAGATACCTATG
ACAGCCTTGTAAAGCTCAATATGAACCCTCTTGCTTCACTTGCTCCGGCAATCAAAGACCTGGCTTCTGCCCAAAAGTCGAGTTTCGCAACCACACAAGC
GGTCTGGCGATTCCTGAATAATGACAAAATCTCTTTTAGTCAGTTAAACCAGCCAATTGAACATCTTGCATGTGAACAGATCAAGGCATCACCGCATCAA
TATGCATTGATTGTTCATGACTGGTCTCAGCTACAGTATGTGAAACACCATCATAAAATTCAGCGCCTGCAAAGAACCCATCAATATGATTCAGGCTATG
AATTGCAAAGCAGTCTGCTGGTTGATGCAGCCTCGGGACTACCTATTGCGCCACTGGCGCAGACACTATCAGATGCCTCAGGCTGCTATTCCACATTCAG
TCAACACTCTGCTGGGCGCAAATCTCATCTAGATTCACTTACCGAACAAATCAAAGTGATTGAACAATATCCCATTGAGAAAACATGTGTTCATATCATT
GATCGTGAAGGTGACTCCATTGCCCACCTAAGGGAAATGAGCAGCCAGGGTTTTAAATGGCTGATTCGGGCGAAAGAAGGCCATCGAATTGAGCATCAGG
GCAAAACATGCAAAGTTGCAGAAGCCGCAGAACGAGTAGAAACGCAGCAGGTCCAGCCGATTGCCTATAAAGGAAACCGGCATATGTTGCATGTGGGAGA
AACTGCTATCCGGATAACACGTGCAGCAAAACCGAAGAGAAATGACGATTCAGGCCAACGGGTTGCTCCCCAGCCAGGGAGTGCGATTGAAGCCAGATTA
ATTGTTGCCGTAGTGAAAGATGATCAGGATAAGACCGTCGCAAGATGGTCACTAATCAGCAATGTTCCATCAGAGATTACTACGGTAGAGATGACGACCT
GGTATTACTGGCGCTGGACAATTGAATGCTATTTCAAGCTGCTCAAGCAGGCAGGTCATGATATTGAAGCATGGCTTCAGACCAGACCTGAAGCCATTTT
AAGGCGGTTACTGATTAGCTGTATGGCTTGTGTTTTAACTTGGCGAATCCAGCGTTCTGAAGATGAACACCATCAGAAAATTCGTGTATTTCTCACCCGT
CTTTCAGGTCGGCAGCAGAAAAGAGGTAGGTTGGAAAGTGCACCTGCCTTATTGGCAGGGCTTTCGATTTTACTGAACACTCTTCAACTGCTCTCGGAAT
ATTCAATAGATGAACTCAATGAGATAGCCACAATGGCATTAGGTATCTCATAGATGTGTAGATACCTATG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1233 bp | 377 aa | 121 | 1353 | + | No |
Chemistry : DDE
ORF sequence :
MNPLASLAPAIKDLASAQKSSFATTQAVWRFLNNDKISFSQLNQPIEHLACEQIKASPHQYALIVHDWSQLQYVKHHHKIQRLQRTHQYDSGYELQSSLL
VDAASGLPIAPLAQTLSDASGCYSTFSQHSAGRKSHLDSLTEQIKVIEQYPIEKTCVHIIDREGDSIAHLREMSSQGFKWLIRAKEGHRIEHQGKTCKVA
EAAERVETQQVQPIAYKGNRHMLHVGETAIRITRAAKPKRNDDSGQRVAPQPGSAIEARLIVAVVKDDQDKTVARWSLISNVPSEITTVEMTTWYYWRWT
IECYFKLLKQAGHDIEAWLQTRPEAILRRLLISCMACVLTWRIQRSEDEHHQKIRVFLTRLSGRQQKRGRLESAPALLAGLSILLNTLQLLSEYSIDELN
EIATMALGIS
VDAASGLPIAPLAQTLSDASGCYSTFSQHSAGRKSHLDSLTEQIKVIEQYPIEKTCVHIIDREGDSIAHLREMSSQGFKWLIRAKEGHRIEHQGKTCKVA
EAAERVETQQVQPIAYKGNRHMLHVGETAIRITRAAKPKRNDDSGQRVAPQPGSAIEARLIVAVVKDDQDKTVARWSLISNVPSEITTVEMTTWYYWRWT
IECYFKLLKQAGHDIEAWLQTRPEAILRRLLISCMACVLTWRIQRSEDEHHQKIRVFLTRLSGRQQKRGRLESAPALLAGLSILLNTLQLLSEYSIDELN
EIATMALGIS
Blast result :
Comments
ISAlw8 is 58% aa similar to ISPpr4.
References
1] Janos Kiss (2019) Direct submission.
2] Alexandra Veress, Tibor Nagy, Tímea Wilk, János Kömüves, Ferenc Olasz & János Kiss. (2020) Sci Rep 10, 2969.
2] Alexandra Veress, Tibor Nagy, Tímea Wilk, János Kömüves, Ferenc Olasz & János Kiss. (2020) Sci Rep 10, 2969.