ISAlw9
- Family IS4
- Group IS4
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Acinetobacter lwoffii | Acinetobacter lwoffii Acinetobacter lwoffii M2a |
DNA section
IS Length : 1392 bp
Ends
IR Length : 18
IRL : TAATGCCAGTCAGTTAAGCAGACATTAGAAAAATGTAGTAAAAATGAGTG
IRR : TAATGCCAGTCAGTTAAGAAATTGACTGGCATTTTCTTGGGTATTTCTGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
gcggataaaggtaaaaaacc | cctcaatcgagg | ggctttaaattaaatagctt | 12 |
attgaattgacataaaagct | ctcattaatgag | ggcttttttattaagtgaaa | 12 |
DNA sequence
TAATGCCAGTCAGTTAAGCAGACATTAGAAAAATGTAGTAAAAATGAGTGTATGCCAATACGCTCATTTTTTTTATGACTTTATCTGAAAATTTAGATTG
CACCCTTCAACATTCTTTGCCTTCACTCAGCCATTTCAGTGAACTCATTGATTTAAACTGGATTAAAGAAAGCCTACATCAAACAGGTAAGGCTTCTATC
AGGAGAAGAAAATTACCTGCCGAACATGTGGTATGGCTGGTAATTGGGCTTGCCCTATTTCGAGATCAACCGATCGGGTATGTCGTAGAGCAACTAAAAC
TTGTGTTTGGTACAACAGAATATTGTGTCCCCAGTGCAGCAGTGCAAGCACGACAACGTTTAGGACGAGAGCCCTTGAATACCTTGTTTTCTCTACTCAG
CCAAGCCTGGTTTGAAGAATCCCAACAGCAATACTCAAACTTTCATGGCCTTAGTGTATGTGCTGTTGACGGGGTGGTTTGGTCTATGCCTTATACAGAC
GAGAATTTTGAACACTTTGGCTCATCTAAGGGTAAAACCGCTGCAGCCCCTTATCCACAAGTGAGAGCAACCTGCCTGGTAAATACCAGCACCCATGAAA
TCATTGATGCCCAAATAGGTAGCATGGATCAGGGTGAACTTACACTGGCAAATCGATTATGTCCTCCATCGCATAGTATTACCTTGTTTGATCGAGCCTA
TTTCTCTGCTGATTTCTTGATTGACTGGCAAACACGAGTAGAAGCCAGTCATTGGTTAATGAGAGCAAAAGATAATTTACGCTATGAGATCATTAAACGT
AATTCCCCGCATGACTTTCAAATCAAAATGCCTCTTTCAGCTAGAGCCAGGAAGCTAAATCCATCATTAGGAGAATATTGGGAAGCGCGTTTGATTGAAG
TTGAGCAGGCAGGGAAAATTAGACGTTATATCACTTCATTAATGGATTCAAAGGCATATCCACTGATAGGCTTGGCGAAGCTTTATGCCCAGCGCTGGGA
AATAGAAATGTGTTACCGAGAAATCAAAAGTGATTTACAGGAAGGCAAGCATTTGAGGAGCAAGCAACCTGATTTAATTTATCAAGAATTATGGGGGGTC
TTCATTGCCTATAATATTCTAAGAAGACAAATGAAACATATGGCTCAACGAGCAAAAGTCAGTCCTTTGAGAATCAGCTTTCATATTGCATCTATCGGTA
TCCTGAATATATTAAGATTTGACTCTTTAGACTCCGCAGGGAATTTACCCAAACATCTAGAAAGTTTACTGGAGAAATCTAAGAGGTATGTGTTGCCTGA
GAGGAGGGTTAGAAGTTGCCCACGAGTTGTGAAAGGAAAACCACAGAAATACCCAAGAAAATGCCAGTCAATTTCTTAACTGACTGGCATTA
CACCCTTCAACATTCTTTGCCTTCACTCAGCCATTTCAGTGAACTCATTGATTTAAACTGGATTAAAGAAAGCCTACATCAAACAGGTAAGGCTTCTATC
AGGAGAAGAAAATTACCTGCCGAACATGTGGTATGGCTGGTAATTGGGCTTGCCCTATTTCGAGATCAACCGATCGGGTATGTCGTAGAGCAACTAAAAC
TTGTGTTTGGTACAACAGAATATTGTGTCCCCAGTGCAGCAGTGCAAGCACGACAACGTTTAGGACGAGAGCCCTTGAATACCTTGTTTTCTCTACTCAG
CCAAGCCTGGTTTGAAGAATCCCAACAGCAATACTCAAACTTTCATGGCCTTAGTGTATGTGCTGTTGACGGGGTGGTTTGGTCTATGCCTTATACAGAC
GAGAATTTTGAACACTTTGGCTCATCTAAGGGTAAAACCGCTGCAGCCCCTTATCCACAAGTGAGAGCAACCTGCCTGGTAAATACCAGCACCCATGAAA
TCATTGATGCCCAAATAGGTAGCATGGATCAGGGTGAACTTACACTGGCAAATCGATTATGTCCTCCATCGCATAGTATTACCTTGTTTGATCGAGCCTA
TTTCTCTGCTGATTTCTTGATTGACTGGCAAACACGAGTAGAAGCCAGTCATTGGTTAATGAGAGCAAAAGATAATTTACGCTATGAGATCATTAAACGT
AATTCCCCGCATGACTTTCAAATCAAAATGCCTCTTTCAGCTAGAGCCAGGAAGCTAAATCCATCATTAGGAGAATATTGGGAAGCGCGTTTGATTGAAG
TTGAGCAGGCAGGGAAAATTAGACGTTATATCACTTCATTAATGGATTCAAAGGCATATCCACTGATAGGCTTGGCGAAGCTTTATGCCCAGCGCTGGGA
AATAGAAATGTGTTACCGAGAAATCAAAAGTGATTTACAGGAAGGCAAGCATTTGAGGAGCAAGCAACCTGATTTAATTTATCAAGAATTATGGGGGGTC
TTCATTGCCTATAATATTCTAAGAAGACAAATGAAACATATGGCTCAACGAGCAAAAGTCAGTCCTTTGAGAATCAGCTTTCATATTGCATCTATCGGTA
TCCTGAATATATTAAGATTTGACTCTTTAGACTCCGCAGGGAATTTACCCAAACATCTAGAAAGTTTACTGGAGAAATCTAAGAGGTATGTGTTGCCTGA
GAGGAGGGTTAGAAGTTGCCCACGAGTTGTGAAAGGAAAACCACAGAAATACCCAAGAAAATGCCAGTCAATTTCTTAACTGACTGGCATTA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1305 bp | 434 aa | 75 | 1379 | + | No |
Chemistry : DDE
ORF sequence :
MTLSENLDCTLQHSLPSLSHFSELIDLNWIKESLHQTGKASIRRRKLPAEHVVWLVIGLALFRDQPIGYVVEQLKLVFGTTEYCVPSAAVQARQRLGREP
LNTLFSLLSQAWFEESQQQYSNFHGLSVCAVDGVVWSMPYTDENFEHFGSSKGKTAAAPYPQVRATCLVNTSTHEIIDAQIGSMDQGELTLANRLCPPSH
SITLFDRAYFSADFLIDWQTRVEASHWLMRAKDNLRYEIIKRNSPHDFQIKMPLSARARKLNPSLGEYWEARLIEVEQAGKIRRYITSLMDSKAYPLIGL
AKLYAQRWEIEMCYREIKSDLQEGKHLRSKQPDLIYQELWGVFIAYNILRRQMKHMAQRAKVSPLRISFHIASIGILNILRFDSLDSAGNLPKHLESLLE
KSKRYVLPERRVRSCPRVVKGKPQKYPRKCQSIS
LNTLFSLLSQAWFEESQQQYSNFHGLSVCAVDGVVWSMPYTDENFEHFGSSKGKTAAAPYPQVRATCLVNTSTHEIIDAQIGSMDQGELTLANRLCPPSH
SITLFDRAYFSADFLIDWQTRVEASHWLMRAKDNLRYEIIKRNSPHDFQIKMPLSARARKLNPSLGEYWEARLIEVEQAGKIRRYITSLMDSKAYPLIGL
AKLYAQRWEIEMCYREIKSDLQEGKHLRSKQPDLIYQELWGVFIAYNILRRQMKHMAQRAKVSPLRISFHIASIGILNILRFDSLDSAGNLPKHLESLLE
KSKRYVLPERRVRSCPRVVKGKPQKYPRKCQSIS
Blast result :
Comments
ISAlw9 is 58% aa similar to ISEch9.
References
1] Janos Kiss (2019) Direct submission.
2] Alexandra Veress, Tibor Nagy, Tímea Wilk, János Kömüves, Ferenc Olasz & János Kiss. (2020) Sci Rep 10, 2969.
2] Alexandra Veress, Tibor Nagy, Tímea Wilk, János Kömüves, Ferenc Olasz & János Kiss. (2020) Sci Rep 10, 2969.