ISKpn66

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Klebsiella pneumoniae
Klebsiella pneumoniae
DNA section
IS Length : 1315 bp

Ends


IR Length : 18/26

IRL : GGGTCTTCCCTTGTTGTGGTGGCTGAGGGCATGATAATGGTATGTTTTAT
IRR : GGGTCTTCCCCGAACATGGTGGGAGACTCAGAAGTCCATGTTTAATCTGC

Insertion site


Left flankDirect repeatRight flankDR Length
ATATTTTCCGTTTT0
AGTAAGGTAATAATTGCACTGTATGTATATACAGTGTGCGCCGGGAGACCGG8

DNA sequence

GGGTCTTCCCTTGTTGTGGTGGCTGAGGGCATGATAATGGTATGTTTTATCACCTGAGAGCATCACCATGGATGAGAAATCTCTCTATGCTCACATCCTT
AACCTGACCGCTTCGTGGCAGGTTAAAGCCCTTTCCCTTGATGAAAAGGTCGGTTCTGTTACCGTTACTGTTGGTATCGCTGAAAACGTGCTGTTATCCT
GCCCGACCTGCGGTAAAACCTGCCCTGTACATGATCACCGGCATCGTAAATGGCGCCATCTCGATACCTGCCAGTTCACCACCGTAGTTGAAGCCGATGT
CCCCCGAATCATGTGCCCGGACCATGGTTGTCAGACCTTACCTGTTCCATGGGCCGGACCGGGAAGCCGATACACACTGCTGTTCGAGTCGTTCGTCATC
TCATGGCTGAAGATCAGCACCACAGATGCCGTCAGGAAACAGCTGAGACTGAGCTGGAATGCGGTCGATAACATTATGCAACGGGCAGTCAGACGTGGAC
TCGCCCGCCGTAAAGCACCACAGTCCGCACGTCACCTCTGTGTTGATGAGGTCGCCTTCAAAAAGGGACATCAGTACGTCACCGTCATCTCTGATACACA
GGGCCAGGCGCTGGAACTCAGGGATGATCGCGGTGTTGAAAGTCTGGCGGGTTACCTCAGAAACCTGGGTGACCGCCAGGTTGAATCCATCAAAACCCTG
TCGATGGATATGAACCCGGCCTATATCAGCGCAGCCCGGGTCCACCTGCCCAACGCGGTAGAAAAAATCGCCTTCGATCACTTCCATGTCGCCAAAATGC
TCTGCGCCGTGGTGGATAAAACCCGGCAGTCAGAGATGAAAACCATCCCGCTGCAGGCCCGAAAAAGCGCACATCGCTCCCGTTACCTGTGGTTGTATGG
CCGTAATAAACGTCATGGTCGGATAGCCGAAAGACTGGAGGCAGCACAGATGGTTCTGCCAGATACCAGTCGTTGCTGGGCAATGAAAGAGCTGGCCCGG
GAGCTCTGGAGCCGTCGGTATGACGAGCAAAGCAGGCGCCTGTGGCAGGAGTGGATAGCGATGGCAAAAGATGTTGGTGTTCCGCTGCTGAGTAGTGCCG
CACGGACGTTACGTAAACGGCTGTACGGGATCCTGAATGCGATGAAATATCGGGTATCAAACGGTAATGCAGAATCGCTGAACAGCAAGATACGGCTGCT
GCGTATCAAATCGAGGGGGTACAGGAACAAAGAACGGTTCAAAGTGGCGGTGATGTTCCATTACGGCAGATTAAACATGGACTTCTGAGTCTCCCACCAT
GTTCGGGGAAGACCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1221 bp406 aa681288+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MDEKSLYAHILNLTASWQVKALSLDEKVGSVTVTVGIAENVLLSCPTCGKTCPVHDHRHRKWRHLDTCQFTTVVEADVPRIMCPDHGCQTLPVPWAGPGS
RYTLLFESFVISWLKISTTDAVRKQLRLSWNAVDNIMQRAVRRGLARRKAPQSARHLCVDEVAFKKGHQYVTVISDTQGQALELRDDRGVESLAGYLRNL
GDRQVESIKTLSMDMNPAYISAARVHLPNAVEKIAFDHFHVAKMLCAVVDKTRQSEMKTIPLQARKSAHRSRYLWLYGRNKRHGRIAERLEAAQMVLPDT
SRCWAMKELARELWSRRYDEQSRRLWQEWIAMAKDVGVPLLSSAARTLRKRLYGILNAMKYRVSNGNAESLNSKIRLLRIKSRGYRNKERFKVAVMFHYG
RLNMDF

 

Blast result :
Comments
ISKpn66 is 88% aa similar to ISSoEn4.
References
1] Philippe Glaser (2020) Direct submission.