ISKqu3

  • Family IS110
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
MN310379 ND Klebsiella quasipneumoniae
Klebsiella quasipneumoniae
Klebsiella quasipneumoniae A2508 plasmid pA2508-NR
DNA section
IS Length : 1424 bp

Ends


Left end : TCTGAATGCCGCTTTGCGGCATGGAGGCGCCAGCAGCAGTTGAGTACAACTCTGATAGTGAGTGGCGCCGTTGCCCGGCGCAGCCGGCTACTGTGTTGAC
Right end : GAAACCGGTACTGTCAACCTGACTATACCAGGCTGGCATTAAACACAAGGTAACGCTCACTGCAATAAGTGAGCGCAGTCCGTTATGAGCGAAAAGCAGA

Insertion site


Left flankDirect repeatRight flankDR Length
GAGCAAGTTCCGGTCGCCACCG0

DNA sequence

TCTGAATGCCGCTTTGCGGCATGGAGGCGCCAGCAGCAGTTGAGTACAACTCTGATAGTGAGTGGCGCCGTTGCCCGGCGCAGCCGGCTACTGTGTTGAC
AGGTTCTGCCTCACCGACCCCCTCCCTTGTATCTAACAGTTTGTGGTGATTAGCTACCACCACTGAAGCAGAGTGAGCCGCCCCCTTCCCTTAAGGTCAG
AAAAGTCGGCACCGCTGAACCTTGATTTGCAGCACATGGCCCTCCGCTTCACCTTTCACGCCAGCACATCAGGTTGAACGGTTACCGGGAGCTCGACTCC
GTATGTACAAGGCGAACAGGCGTGACGGTTTATGTGAGAGGAGTTTGACCATGTTTCCAGTCGGCATTGACGTAAGTAAAAACACCCTGGATCTTTGCAT
GCTTTATGACGGTATCAAAGGACGCATAAAAACCCGTAACATCCAGAATAACAGACATTCAGTTGAAAATATTCTTCGCTGGCTCAGGCTTCAACATTGC
AGTCCGGAAGATGTTCATGTGGTAATGGAAGCTACCGGTGTTTATCACGAACAGCTGGCCACTGAATTACATGATGCCGGTTTCCGGGTTTCTCTGGCCA
ACCCTCACCGTAGTTGGGAGTTTGCGCGTGGCATGGGAATCATGACAAAAACGGATAAGGTGGATGCGTATATGCTGGCCTGTTACGCATTCCTTAAGAA
GCCACACCGCTGGGAGCCGCCGGCACCCGAAATCAGATATCTCGGTGCACTCCTGCGACGGCGGGATGTTCTGCTGGGTGATGCCCTGCGTGAGGAGAAC
AGACTGGAAAAATACCTGTCGACAGACACACCTGCAGATATTATCAGTTCCTGCAGGCGTATGGCGCAGCTTCTGCGCGAGGAGATAAGTAATATCGAGC
GGCAGATAAAAGCACATATCAAAGCCAGCCCTGCACTGAGGCGTGATTATACACTGCTGACCTCAATTAAATCGGTTGGTCCCCAGTTGGGGATGCATAT
GCTGATCGTGCTTCGCAGCCATAACTTTGTATCGGCTGAGCAGGCTGCCGCCTTTCTGGGCGTGGTGCCGATCGAGAAACGCTCAGGCACATCGGTCCGG
CGCCGGCCGCGGATGTCGAAAATCGGCCCCCCTCAGTTGAGAGCGAAGCTTTACATGTCCGCCCTGTGCGGAAAAATCTACAATAAGCGAATGCGTAATA
TTTACGATGAGATGTGCCTGCGGGGTAAACCTAAAATGGTGGCCATTGGCGCGCTGATGCGGAAACTGGTGCACTGGTGTTATGGCGTCCTGAAGACCGG
AACCGTTTTTAATGACGAAGACCTGAAACCGGTACTGTCAACCTGACTATACCAGGCTGGCATTAAACACAAGGTAACGCTCACTGCAATAAGTGAGCGC
AGTCCGTTATGAGCGAAAAGCAGA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
996 bp331 aa3511346+No
ORF function : Transposase
Chemistry : DEDD

ORF sequence :

MFPVGIDVSKNTLDLCMLYDGIKGRIKTRNIQNNRHSVENILRWLRLQHCSPEDVHVVMEATGVYHEQLATELHDAGFRVSLANPHRSWEFARGMGIMTK
TDKVDAYMLACYAFLKKPHRWEPPAPEIRYLGALLRRRDVLLGDALREENRLEKYLSTDTPADIISSCRRMAQLLREEISNIERQIKAHIKASPALRRDY
TLLTSIKSVGPQLGMHMLIVLRSHNFVSAEQAAAFLGVVPIEKRSGTSVRRRPRMSKIGPPQLRAKLYMSALCGKIYNKRMRNIYDEMCLRGKPKMVAIG
ALMRKLVHWCYGVLKTGTVFNDEDLKPVLST

 

Blast result :
Comments
ISKqu3 is 69% aa similar to ISEch1.
References
1] Yanan Xu (2020) Direct submission.
2] Xu,Y. (2019) Direct GenBank submission.