ISAba62
- Family IS5
- Group IS903
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| CP073061 | ND | Acinetobacter baumannii | Acinetobacter baumannii Acinetobacter baumannii plasmid pDETAB13 Acinetobacter baumannii plasmid pCAM180A |
DNA section
IS Length : 1039 bp
Ends
IR Length : 15/16
IRL : GGCTTTGTTGCACAAACCTATCTGTAAAGGTTTTTTCAGCGATATAATTT
IRR : GGCTTTATTGCACAAAGATTTGAAATGCAAAGCGCCCCTAATTGAGCCAA
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| TCAACTTTTG | AAAGAAAAG | TGACTAACGCA | 9 |
DNA sequence
GGCTTTGTTGCACAAACCTATCTGTAAAGGTTTTTTCAGCGATATAATTTTCAAATGAAGAAGCCTACACATAAAATCTATCGTACAACCAATTGGTCCG
TATATAACCGAGCTCTTATTAATCGTGGGAATATTGCCATTTGGTTCGATCCAAAAACCCAGTGGTATGCACAATCACAAGGTAAGCATGGTCGAAATCA
AACCTATTCTGATACTGCCATCCAGTGCTGTCTGATGATCAAATCCCTATTTCGATTGTCTTTACGCATGGTCACAGGTTTTGTTCAAAGTCTGATTAAA
CTTTGTGGATTAAATTGGACAGCGCCAGATTACAGTACGCTGTGTAGAGGACAAAAGCATATTGATATTGTAATCAGCTACCAAAAAAGTAGCGATGGGC
TGCATCTACTCATGGACTCTACAGGCATGAAGTTTCTAGGTGAGGGCGAATGGAAACGCAAGAAACATGGACCTGAATATCGTCGCCAATGGCGTAAATT
ACATATTGGTATAGATGCTAAGACCCTGCAAATACGCGCTATTCAGCTCACAACCAATAATGTCAGTGATTCACAGGTACTTGGTGATTTACTTGATCAG
ATTCCACAAGATGAGCAGATTGACTCTGTTTATACCGATGGAGCTTATGACACCAAGAAATGCCGTCAGGTCATTGCAGATCGGCAAGCGCATGCGGTGA
TTCCACCTAGAAAAAATGCGAAACCATGGAAAGATACAAAGAGCAGCTCGCTAGAGCGAAATGAATTACTTCGAACAGTTAAACGTTTAGGTAGGACACT
ATGGAAAAAATGGTCAGGCTATCATCGGCGAAGTTTGGTTGAAACTAAGATGCATTGCATCAAATTATTAGGAGATAAACTTAGTGCAAGGAGCTTTGAT
AGCCAAGTCAATGAGATTCATGCACGTGTAGCAGTCCTCAACAGATTTACGGAATTAGGTCGACCACTTACCCAAGTTATGCCTTAAATTTGGCTCAATT
AGGGGCGCTTTGCATTTCAAATCTTTGTGCAATAAAGCC
TATATAACCGAGCTCTTATTAATCGTGGGAATATTGCCATTTGGTTCGATCCAAAAACCCAGTGGTATGCACAATCACAAGGTAAGCATGGTCGAAATCA
AACCTATTCTGATACTGCCATCCAGTGCTGTCTGATGATCAAATCCCTATTTCGATTGTCTTTACGCATGGTCACAGGTTTTGTTCAAAGTCTGATTAAA
CTTTGTGGATTAAATTGGACAGCGCCAGATTACAGTACGCTGTGTAGAGGACAAAAGCATATTGATATTGTAATCAGCTACCAAAAAAGTAGCGATGGGC
TGCATCTACTCATGGACTCTACAGGCATGAAGTTTCTAGGTGAGGGCGAATGGAAACGCAAGAAACATGGACCTGAATATCGTCGCCAATGGCGTAAATT
ACATATTGGTATAGATGCTAAGACCCTGCAAATACGCGCTATTCAGCTCACAACCAATAATGTCAGTGATTCACAGGTACTTGGTGATTTACTTGATCAG
ATTCCACAAGATGAGCAGATTGACTCTGTTTATACCGATGGAGCTTATGACACCAAGAAATGCCGTCAGGTCATTGCAGATCGGCAAGCGCATGCGGTGA
TTCCACCTAGAAAAAATGCGAAACCATGGAAAGATACAAAGAGCAGCTCGCTAGAGCGAAATGAATTACTTCGAACAGTTAAACGTTTAGGTAGGACACT
ATGGAAAAAATGGTCAGGCTATCATCGGCGAAGTTTGGTTGAAACTAAGATGCATTGCATCAAATTATTAGGAGATAAACTTAGTGCAAGGAGCTTTGAT
AGCCAAGTCAATGAGATTCATGCACGTGTAGCAGTCCTCAACAGATTTACGGAATTAGGTCGACCACTTACCCAAGTTATGCCTTAAATTTGGCTCAATT
AGGGGCGCTTTGCATTTCAAATCTTTGTGCAATAAAGCC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 933 bp | 310 aa | 55 | 987 | + | No |
Chemistry : DDE
ORF sequence :
MKKPTHKIYRTTNWSVYNRALINRGNIAIWFDPKTQWYAQSQGKHGRNQTYSDTAIQCCLMIKSLFRLSLRMVTGFVQSLIKLCGLNWTAPDYSTLCRGQ
KHIDIVISYQKSSDGLHLLMDSTGMKFLGEGEWKRKKHGPEYRRQWRKLHIGIDAKTLQIRAIQLTTNNVSDSQVLGDLLDQIPQDEQIDSVYTDGAYDT
KKCRQVIADRQAHAVIPPRKNAKPWKDTKSSSLERNELLRTVKRLGRTLWKKWSGYHRRSLVETKMHCIKLLGDKLSARSFDSQVNEIHARVAVLNRFTE
LGRPLTQVMP
KHIDIVISYQKSSDGLHLLMDSTGMKFLGEGEWKRKKHGPEYRRQWRKLHIGIDAKTLQIRAIQLTTNNVSDSQVLGDLLDQIPQDEQIDSVYTDGAYDT
KKCRQVIADRQAHAVIPPRKNAKPWKDTKSSSLERNELLRTVKRLGRTLWKKWSGYHRRSLVETKMHCIKLLGDKLSARSFDSQVNEIHARVAVLNRFTE
LGRPLTQVMP
Blast result :
Comments
ISAba62 is 96% aa similar to ISAba12.
ISAba62 was found in plasmid pDETAB13 of an Acinetobacter baumannii isolated from a patient rectal swab in an intensive care unit in Hangzhou in 2019.
ISAba62 was found in plasmid pDETAB13 of an Acinetobacter baumannii isolated from a patient rectal swab in an intensive care unit in Hangzhou in 2019.
References
1] Robert Moran (2021) Direct submission.