ISKmi4

  • Family ISAs1
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Klebsiella michiganensis
Klebsiella michiganensis
DNA section
IS Length : 1256 bp

Ends


IR Length : 18

IRL : GTATGTGAGCCAGGGCGAGATCGCGAACGTTTTTTAAGCAGCACAAGAAA
IRR : GCTCACATACCAGGGCGAGAGCGTGAACAAATTGTTAAATCAGAGCCAGT

Insertion site


Left flankDirect repeatRight flankDR Length
CAGGGCGAGATCGCGAACGTATGTGAGCGTTCACGCTCTCGCCCTG10

DNA sequence

GTATGTGAGCCAGGGCGAGATCGCGAACGTTTTTTAAGCAGCACAAGAAAATTTGACCGACTGATCCGAGTGTGATCTTATGCTCTCTTTTACGGGAGTT
TCATTATGAACCACCATGCTGCATTTACTCAATTCTTCTCTGAACTTGAAGATCCTCGCCAGGCTGCAAAAATCGCGTACCCCTTCTTCGATGTGCTCTT
TCTGACCGTTTGTGCCGCTATCGGAGGGTTTGTTGGTTGGGAAGATATTGAGACGTTCGGTGAGGCTCACCTTGAGTGGCTTCAGCGTAAGGGATTGTTT
CCTAACGGATTGCCTGTTCACGACACCATAGCTAGGATCGTTTCCCGTGTTCAACCGGAGCAATTTCAGAACGCCTTTGTTCGTTGGATGCAGGCGACGA
GCAAACGTACCAATGGTGAATTGGTCGCCATTGATGGCAAGACCTTGCGTAGCTCGTATGACCGCAATAGTCGCCAATCCACCATCCATATGGTCAGTGC
CTTTGCCGCTCAAAATCGTCTGGTGCTCGGTCAGGTGAAAACAGATGCCAAGTCCAATGAAATTACCGCCATTCCGGAATTACTCGCCCTACTCGATATA
AAAGGCTGTCTGGTCTCCATCGATGCCATGGGTTGCCAGACCGAGATAGCCTCAACCATAGTCGAAGGCGGAGGCGACTACTTGTTGGCGGTAAAAGGTA
ACCAACCCTCGCTACATAACGCCGTGCGAGAGGCATTGGCTGAGTCCACAAAGAAGCCTCTGAGCAAAGAGACGCTCAGTATTGAAAAAGAGCACGGTCG
CATAGATGGCCGCGAGTACCATGTGCTACCAGCCGGAGTACTGGCAGAGCAATTTCCGGAGTGGAAAAACCTCAAGAGTGTTGGCGTAGCGATATCCTAT
CGAACTGAAAAAAATAGAGAAATTTCAATGGAGTATCGCTACTACATCAGCTCGGCGGAACTGACGCTGGAGCAATTCGCCTCAGCGGTACGGGGACACT
GGGCGATTGAAAATAGCCTGCACTGGGTCCTGGATGTGGTGATGAATGAGGATGCCTGCCAGATATATCGTGGTGATGCTCCACAGATATTGGCCTGCGC
TCGACACATGGCGCAGAACATGCTGCGAGCCGAAAAAAGCCGCAAAGCGAGCTTGCGGAAGAAGCAGCAATTTGCCGGCATGAGTAGTGCCTATCTGGAA
AAGGTGCTGGAAGCTGGGTTAACTCAACTGGCTCTGATTTAACAATTTGTTCACGCTCTCGCCCTGGTATGTGAGC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1 bp379 aa00+No
ORF function : Transposase
Description :

ORF sequence :

ATGAACCACCATGCTGCATTTACTCAATTCTTCTCTGAACTTGAAGATCCTCGCCAGGCTGCAAAAATCGCGTACCCCTTCTTCGATGTGCTCTTTCTGA
CCGTTTGTGCCGCTATCGGAGGGTTTGTTGGTTGGGAAGATATTGAGACGTTCGGTGAGGCTCACCTTGAGTGGCTTCAGCGTAAGGGATTGTTTCCTAA
CGGATTGCCTGTTCACGACACCATAGCTAGGATCGTTTCCCGTGTTCAACCGGAGCAATTTCAGAACGCCTTTGTTCGTTGGATGCAGGCGACGAGCAAA
CGTACCAATGGTGAATTGGTCGCCATTGATGGCAAGACCTTGCGTAGCTCGTATGACCGCAATAGTCGCCAATCCACCATCCATATGGTCAGTGCCTTTG
CCGCTCAAAATCGTCTGGTGCTCGGTCAGGTGAAAACAGATGCCAAGTCCAATGAAATTACCGCCATTCCGGAATTACTCGCCCTACTCGATATAAAAGG
CTGTCTGGTCTCCATCGATGCCATGGGTTGCCAGACCGAGATAGCCTCAACCATAGTCGAAGGCGGAGGCGACTACTTGTTGGCGGTAAAAGGTAACCAA
CCCTCGCTACATAACGCCGTGCGAGAGGCATTGGCTGAGTCCACAAAGAAGCCTCTGAGCAAAGAGACGCTCAGTATTGAAAAAGAGCACGGTCGCATAG
ATGGCCGCGAGTACCATGTGCTACCAGCCGGAGTACTGGCAGAGCAATTTCCGGAGTGGAAAAACCTCAAGAGTGTTGGCGTAGCGATATCCTATCGAAC
TGAAAAAAATAGAGAAATTTCAATGGAGTATCGCTACTACATCAGCTCGGCGGAACTGACGCTGGAGCAATTCGCCTCAGCGGTACGGGGACACTGGGCG
ATTGAAAATAGCCTGCACTGGGTCCTGGATGTGGTGATGAATGAGGATGCCTGCCAGATATATCGTGGTGATGCTCCACAGATATTGGCCTGCGCTCGAC
ACATGGCGCAGAACATGCTGCGAGCCGAAAAAAGCCGCAAAGCGAGCTTGCGGAAGAAGCAGCAATTTGCCGGCATGAGTAGTGCCTATCTGGAAAAGGT
GCTGGAAGCTGGGTTAACTCAACTGGCTCTGATTTAA

 

Blast result :
Comments
References