ISAba68
- Family IS5
- Group IS903
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| CP041149 | ND | Acinetobacter baumannii | Acinetobacter baumannii Acinetobacter pittii Acinetobacter baumannii plasmid pCUVET596 Acinetobacter baumannii CUVET-MIC596 |
DNA section
IS Length : 1039 bp
Ends
IR Length : 16
IRL : GGCTTTGTTGCACAAACCTATCTCTAAAGGCTTATTCCACAATATAATTC
IRR : GGCTTTGTTGCACAAAGATTTGAAATGCAAAGCGCCCCTAATTGAGCCAA
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| GTGTGTTGCT | GTAGGTAAC | ACTAAACCTT | 9 |
| CAAAAAACAC | GCTATATAG | TAAAAAGACA | 9 |
| ACATCTTCAT | AATCATAAGT | 0 |
DNA sequence
GGCTTTGTTGCACAAACCTATCTCTAAAGGCTTATTCCACAATATAATTCTCAAATGAATAAGCCCACACCTAAAATCTATCGTACAACCAATTGGTCTT
CTTATAACAGTGCATTAATAAATCGAGGAAATCTCTCAATTTGGTTTGATCCCAAGACTCAATGGTACGCTCAACCCAAAGGTAAACATGGTCGAAATCA
AACTTATTCAGATACAGCCATCCAATGCTGTTTAATGATCAAATCCTTATTTCGTCTTTCTTTACGCATGGTCACTGGCTTTGTGCAAAGTCTCATTCAT
CTTTGTAGATTAGATTGGACAGCACCGGATTATTCAACCATTTGTAGAAGACAAAAGCATATTGATATTGCAATTAACTATCAAAAAAGCAGTAATGGTC
TCCAGCTACTCGTCGATTCTACTGGCTTAAAGTTTCTAGGCGAAGGTGAATGGAAGCGTAAGAAACACCAACCTGAATATCGTCGCCAATGGCGTAAACT
ACATATTGGTATAGATGCCAAAACCCTACAAATACGCGCTATTCAGCTCACAACCAATAATGTCAGTGATTCACAGGTGCTTGGTGATTTACTTAATCAG
ATTCCACAAGATGAGCAGATTGACTCTGTTTATACCGATGGAGCTTATGACACCAAGCAATGCCGTCAGGTCATTGCAGATCGGCAAGCGCATGCGGTGA
TTCCACCTAGAAAAAATGCGAAACCATGGAAAGATACAAAGATCAGCTCTCTAGAGCGAAATGAATTACTTCGAACAGTTAAACGTTTAGGCAGGACATT
ATGGAAAAAATGGTCAGGCTATCATCGTCGAAGTTTGGTTGAAACTAAGATGCATTGCATCAAATTATTAGGAGATAAACTCAGTGCAAGGAGTTTTGAT
AGCCAAGTGAATGAGATCCATGCACGTGTAGCAGTCCTTAACAGATTTACGGAATTAGGTCGACCACTTACCCAAGTTACGCCTTAAATTTGGCTCAATT
AGGGGCGCTTTGCATTTCAAATCTTTGTGCAACAAAGCC
CTTATAACAGTGCATTAATAAATCGAGGAAATCTCTCAATTTGGTTTGATCCCAAGACTCAATGGTACGCTCAACCCAAAGGTAAACATGGTCGAAATCA
AACTTATTCAGATACAGCCATCCAATGCTGTTTAATGATCAAATCCTTATTTCGTCTTTCTTTACGCATGGTCACTGGCTTTGTGCAAAGTCTCATTCAT
CTTTGTAGATTAGATTGGACAGCACCGGATTATTCAACCATTTGTAGAAGACAAAAGCATATTGATATTGCAATTAACTATCAAAAAAGCAGTAATGGTC
TCCAGCTACTCGTCGATTCTACTGGCTTAAAGTTTCTAGGCGAAGGTGAATGGAAGCGTAAGAAACACCAACCTGAATATCGTCGCCAATGGCGTAAACT
ACATATTGGTATAGATGCCAAAACCCTACAAATACGCGCTATTCAGCTCACAACCAATAATGTCAGTGATTCACAGGTGCTTGGTGATTTACTTAATCAG
ATTCCACAAGATGAGCAGATTGACTCTGTTTATACCGATGGAGCTTATGACACCAAGCAATGCCGTCAGGTCATTGCAGATCGGCAAGCGCATGCGGTGA
TTCCACCTAGAAAAAATGCGAAACCATGGAAAGATACAAAGATCAGCTCTCTAGAGCGAAATGAATTACTTCGAACAGTTAAACGTTTAGGCAGGACATT
ATGGAAAAAATGGTCAGGCTATCATCGTCGAAGTTTGGTTGAAACTAAGATGCATTGCATCAAATTATTAGGAGATAAACTCAGTGCAAGGAGTTTTGAT
AGCCAAGTGAATGAGATCCATGCACGTGTAGCAGTCCTTAACAGATTTACGGAATTAGGTCGACCACTTACCCAAGTTACGCCTTAAATTTGGCTCAATT
AGGGGCGCTTTGCATTTCAAATCTTTGTGCAACAAAGCC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 933 bp | 310 aa | 55 | 987 | + | No |
Chemistry : DDE
ORF sequence :
MNKPTPKIYRTTNWSSYNSALINRGNLSIWFDPKTQWYAQPKGKHGRNQTYSDTAIQCCLMIKSLFRLSLRMVTGFVQSLIHLCRLDWTAPDYSTICRRQ
KHIDIAINYQKSSNGLQLLVDSTGLKFLGEGEWKRKKHQPEYRRQWRKLHIGIDAKTLQIRAIQLTTNNVSDSQVLGDLLNQIPQDEQIDSVYTDGAYDT
KQCRQVIADRQAHAVIPPRKNAKPWKDTKISSLERNELLRTVKRLGRTLWKKWSGYHRRSLVETKMHCIKLLGDKLSARSFDSQVNEIHARVAVLNRFTE
LGRPLTQVTP
KHIDIAINYQKSSNGLQLLVDSTGLKFLGEGEWKRKKHQPEYRRQWRKLHIGIDAKTLQIRAIQLTTNNVSDSQVLGDLLNQIPQDEQIDSVYTDGAYDT
KQCRQVIADRQAHAVIPPRKNAKPWKDTKISSLERNELLRTVKRLGRTLWKKWSGYHRRSLVETKMHCIKLLGDKLSARSFDSQVNEIHARVAVLNRFTE
LGRPLTQVTP
Blast result :
Comments
ISAba68 is 98% aa similar to ISAha1.
ISAba68 was found in the GR13-type plasmid of A. baumannii CUVET-MIC596. A copy of ISAba68 is also present in the CUVET-MIC596 chromosome. Both copies are flanked by 9 bp target site duplications.
Additionnal GenBank accession number : CP041148 and CP027254.
ISAba68 was found in the GR13-type plasmid of A. baumannii CUVET-MIC596. A copy of ISAba68 is also present in the CUVET-MIC596 chromosome. Both copies are flanked by 9 bp target site duplications.
Additionnal GenBank accession number : CP041148 and CP027254.
References
1] Moran R (2022) Direct submission.