ISAnasp1

  • Family IS1202
  • Group IS1202
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
RAZK01000180 ND Anaerotruncus sp.
Anaerotruncus sp. 1XD22-93
DNA section
IS Length : 1527 bp

Ends


IR Length : 23/32

IRL : TATGATTCGAAAATGATAATGTCTTAATGAAACGAAATTGATTATGTCCT
IRR : TGTCAAGCGAAAATGAAAATGTCCCAAAAAAAGTTAAACATTAGCACCAA

Insertion site


Left flankDirect repeatRight flankDR Length
CAGTTTTTATAAAAAACAGTTTTTTGCTTCAT0

DNA sequence

TATGATTCGAAAATGATAATGTCTTAATGAAACGAAATTGATTATGTCCTAAAGAAGGATTAAAATAAGACCTCATGAGAAAGTGAGGTCATTATGCGAA
AGGTGGATCTTAGAATGAATGAACAAGCAAAGTATGACATTATCAAAAAACTTGTTGATACCAATGGTAATAAAAAGAATGCTGCGATTAAACTTAACTG
CTCCATGCGCACTGTCAATCGTTTGATCTTCAAATATAAGAAGGAAGGCAAACAGGGCTTTATTCACAAAAACAGAGGCAGGAAGCCTGTTACTGCTTTC
TCTGATGATGTCAAAGCGTCTGTGATTGATTTATACACATCCAAGTACTTTGGCGCCAACCTCTCCCATTTCTCTCAACTTCTTGCCAAACATGAAGGTA
TTATCGTCAGTGATTCTACCATTCGTCTTTGGCTTCGTGATGTGGATATCTTGTCTCCCAAGGCCAGAAAAAAAACGAAAAGACTCCTTGAGGCTGACCT
GAGAAAGCGCAAAAAAGCCTCTGCTTCCTTCAAACAAAAGGCTGCCATTGAAGATAAACTGGAACTGCTAAACCGCTCTGACGTCCATCCCAGACGCTCC
AGATGCGCTTATATGGGGGAATTAGTTCAAATGGATGCCTCTCCTCATCTTTGGTTTGGCAATACCATCTCTCACCTACATTTGGCCATTGACGATGCTT
CAGGTAAGATTCTAGGCGCTTTCTTCGATACACAGGAAACGCTTCATGCCTATTATGAAGTCACTCGTCAGATCCTTTCTAACTATGGTATTCCTGCCAA
ATTCCTTACCGATCGTCGTACTATCTTTGAATACAAAAGAAAAAACGCATCCTCCGATGAAGAAGACACGTTTACTCAGTTCTCCTATGCCTGTCATCAA
CTTGGCATTGAACTGGAATCTACTAGTGTCCCACAAGCCAAAGGACGCATAGAAAGGCTCAATCAGACCTTACAGTCACGTTTAGTCATTGAACTAAGGC
TTGCGGGCATTACCTCGATAGAGGAGGCGAATGAATTCTTGTACTCCTACATAGAAGAATTCAATGCCATGTTCGCTCTACCGCTTAATCATACAAGAAA
TGTGTTTGAAAAGCAACCCTGTGATCGGGATATCAATCACATTCTCTCCATTCTCTCATGTAGGAAACTGGATGGTGGCAACTGCATCCGTTATAAAAAC
AAGTACTATATACCTGTGACACGTAATGCGCATAAGGCATATTTGAAGAAAGGAATGACAGCCATGGTGATTGAAGCCTTTGATGGAAACTTATATGTGA
ATATCTTGGATCATATCTTTGCGTTGGAGGAAGTTCCACTTCGTGAAGCCAAGTCTAAGACCTTTGATCCTGTGGTTAAGGATGTTAAGCCAAGAAAGGT
TTACATTCCTCCCATGTCTCATCCTTGGAAGCACGCTTCTTTTCAGGCTTATCTTGCCAAACAAAAGCACCGTGTTCTTGGTGCTAATGTTTAACTTTTT
TTGGGACATTTTCATTTTCGCTTGACA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1380 bp459 aa1151494+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MNEQAKYDIIKKLVDTNGNKKNAAIKLNCSMRTVNRLIFKYKKEGKQGFIHKNRGRKPVTAFSDDVKASVIDLYTSKYFGANLSHFSQLLAKHEGIIVSD
STIRLWLRDVDILSPKARKKTKRLLEADLRKRKKASASFKQKAAIEDKLELLNRSDVHPRRSRCAYMGELVQMDASPHLWFGNTISHLHLAIDDASGKIL
GAFFDTQETLHAYYEVTRQILSNYGIPAKFLTDRRTIFEYKRKNASSDEEDTFTQFSYACHQLGIELESTSVPQAKGRIERLNQTLQSRLVIELRLAGIT
SIEEANEFLYSYIEEFNAMFALPLNHTRNVFEKQPCDRDINHILSILSCRKLDGGNCIRYKNKYYIPVTRNAHKAYLKKGMTAMVIEAFDGNLYVNILDH
IFALEEVPLREAKSKTFDPVVKDVKPRKVYIPPMSHPWKHASFQAYLAKQKHRVLGANV

 

Blast result :
Comments
ISAnasp1 is 75% aa similar to ISNba1.
References
1] Patricia Siguier (2020) Direct submission.
2] Liu,C. (2018) Direct submission.