ISAnba1

  • Family IS1202
  • Group ISTde1
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
SOHZ01000318 ND Anaerolineales bacterium
Anaerolineales bacterium isolate E26_bin7
DNA section
IS Length : 1539 bp

Ends


IR Length : 21/26

IRL : TGTTATTGTTCAGCGAAATTGACACCACGTAAGTGTTCAGCGAAAATGTC
IRR : TGTCATTGTTCAGGGAATCTGTCACCTTAATTGTTCAACAGAAATGTCAC

Insertion site


Left flankDirect repeatRight flankDR Length
CGTCTCTGAGATCTCCAAGATTCCAGAACTATG0

DNA sequence

TGTTATTGTTCAGCGAAATTGACACCACGTAAGTGTTCAGCGAAAATGTCACCCATGAACAAAAAAGTGACATTAAGCATGAACGAAATCAAAAGATTGG
ACATAATGCACAAGATTGAGAGCAAACAACTAACCAGCAAACAATCTGCTAAACAGTTGGGGTTATCCCTTCGTCAGGTACGGCGGATGATTGCCAGTTT
TCGGGAACAGGGAGCGTTGGGTCTTGTGCATGGCAACCGGGGACGAGCAGCGAACAATCGCATACCGGAAGAGACCCGGGCTCAGGTCCTGGAACTGGCG
GAGAAGGAGTATCGAGACTACAACGATAGTCATTTCACCGAAGAATTAGAAGAGAAATATGGTATAGAAATCTCTCGCTCGACCGTACGCCGCATCCGTC
GGCAGGCAGGGTTGAGCAGTCCCCGCAAGCGCCGACCTCCACGCCATAGGAGGCGCAGGGAGCGCAGAGAGAAAGCCGGGATGCTTCTCCAAACAGATGG
CAGCCGGCACGACTGGCTGGAAGGACGAGGCCAGTGGCTTACCCTGATCGCCTATATTGATGATGCCAACAATGAAGTACTAGGAGCCACCTTCCGGGAC
GAAGAAGATGCTGCCGGGTACTTCCTAGGATTGCAGGAGATTTGCATGAAGCGAGGTATTCCCGGAGCGATTTATGCTGATCGGCATACCATATTTCAAA
GCCCGGTCAAAGCCACCATCGAACAGGAATTGAACGGCGAGCAGCCTAGAAGTCAATTGGGACGATTGCTGGACGAACTGGGAATTGAGTTGATCGTTGC
CAGAAGCCCGCAGGCTAAAGGTCGCGTAGAGCGATTATGGGAGACACTTCAAGACCGGTTGGTGAAGGCATTACGTGAAGCGGGTGCTTCGGACCAGGAA
GAAGCCAATCAAGTGTTGGAAAGCTACTTACCCAAACATAATCAGCGCTTCATGCACGAAGCGGCAGAACCAGGGACAACTTACGTGCCCTGGCCACAGG
AGTACCAGATAAAGGATTTCTTTTGCTTCAAGCATACCCGCAGAGTGACAAACGACAACACTATCTCCTTCGACGGGCACCGACTGCAGATCCCACCTGG
TCCCAAGCGACGAAGCTATGCGAGAGCAAAGGTGGATGTATTGCAGCACTTGGATGGGCAGCTGGAAGTGCGCTACCAAGGACAAAGCCTGGTCACTTTC
AAGCAGGCTAGCGCTCATCCAGTACGAGTGAAGAAGTTTGAGCCTGCCCCTGGACAAGAAACACCCAAATCGGTGTTGGTACAAGAAGAACCAGCTAAGA
CACCCAAACCACGCACACCTTACAAACCAGCTGCCAACCACCCTTGGCGGCGTTATCCACAAAACAGGTAAAAGAGATGATGATATCGACTGGTGGACAA
TGAAAAAGACGAGCGAGATGGTTTGCACCAAACCCGCCCGCCTTCCGTTGGGTATTGTCGATTATACTAGGATGCTTGCATCTGTAAAGGTGACATTTCT
GTTGAACAATTAAGGTGACAGATTCCCTGAACAATGACA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1326 bp441 aa461371+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSPMNKKVTLSMNEIKRLDIMHKIESKQLTSKQSAKQLGLSLRQVRRMIASFREQGALGLVHGNRGRAANNRIPEETRAQVLELAEKEYRDYNDSHFTEE
LEEKYGIEISRSTVRRIRRQAGLSSPRKRRPPRHRRRRERREKAGMLLQTDGSRHDWLEGRGQWLTLIAYIDDANNEVLGATFRDEEDAAGYFLGLQEIC
MKRGIPGAIYADRHTIFQSPVKATIEQELNGEQPRSQLGRLLDELGIELIVARSPQAKGRVERLWETLQDRLVKALREAGASDQEEANQVLESYLPKHNQ
RFMHEAAEPGTTYVPWPQEYQIKDFFCFKHTRRVTNDNTISFDGHRLQIPPGPKRRSYARAKVDVLQHLDGQLEVRYQGQSLVTFKQASAHPVRVKKFEP
APGQETPKSVLVQEEPAKTPKPRTPYKPAANHPWRRYPQNR

 

Blast result :
Comments
ISAnba1 is 61% aa similar to ISChba2.
References
1] Patricia Siguier (2020) Direct submission.
2] Dong,X. and Hubert,C. (2019) Direct GenBank submission.