ISVer3

  • Family IS1202
  • Group ISTde1
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
WRPG01000013 ND Verrucomicrobia subdivision
Verrucomicrobia subdivision 3 bacterium isolate X3_MaxBin.016
DNA section
IS Length : 1548 bp

Ends


IR Length : 26/36

IRL : TGTCGGAACTCCATGAAAATGTCCCCAAGGTAACTCGATAAGAATGTCCC
IRR : TGTCAAAACTCTTTAGAAATGTCCCCTGTTTAACTCACGAGAGAATGTCC

Insertion site


Left flankDirect repeatRight flankDR Length
CGGGCAGGCGCGTCAACCTGGGGTCTTGCGCGAACCCGCTCCGCTCGC15

DNA sequence

TGTCGGAACTCCATGAAAATGTCCCCAAGGTAACTCGATAAGAATGTCCCCTTGGCGGCGGGTTTGCGAAAGCAACCCGCCAACCACATGGAGACATTGA
CAATGAGCCGGAAAGAACGGGCACGACTGACGATCATGACCGGGGTCACGGACGGGAAGCTGACGGTGGTGCAGGCGGCGGAGCTGATGGGGGTGTGCTA
CCGCCAGGGCAAGCGCATCTGGCAGCGCTATCGGGCCGACGGCGACGCCGGGTTGGTGCACCGGCTGCGCAGCAAGGCCAGCGCGCGGCGCAAGCCCGCC
GCGCTGCGGGAGCAAGTGCTGGCCCTGTATGCCCAGGAACGCTACGCCGACTTTGGCCCGACGCTGATGGCCGAGCAACTGGCCAAGCAAAAGCTGGTCG
TGGACCACGAGACCCTGCGGCGCTGGCGCATGGCGGCTGGCCAACACGTGGTGCGGCGGCGCAAGCAGGCGCACCGGCAGTGGCGGGAACGCAAACCCAG
CTTCGGAGCGATGGTGCAACTGGACGGCTCGCACCACGACTGGTTCGAGGGCCGGGGCCCCAAGTGCGTGCTGATGGTGATGGTGGACGACGCGACCAAC
CGGATGCGGGCGCGCTTCTTTGAGGAAGAGACCACGCGTGCCAGCTACGACGTGCTGGAAGGCTGGGTGAGCAAGCACGGCCTGCCCGCCAGCCTGTATG
TGGACCGGGACAGCATCTACCGGTGCGAGGGCGAACCCAGCATCGCGCAACAACTGGCCGGCAAAGCGCCGCAGACGCAGTTTGGGCGGGCCATGGAGCA
CCTGGGGGTGGAACTGATCCTGGCCCATAGCCCGCAAGCCAAAGGGCGGGTAGAGCGGATGAACGGGACGTTGCAAGACCGGCTGGTCAAGGAACTGAGA
CTGGCCGGGATCAGCGACATCGAGAGTGCGAACCGGTTTCTGGACGCGAAGTATCTGCGGGCGTTCCACCGGCAGTTTGGGCGGGTGGCGGCGAGTCCGC
TGGACGTGCATCGCGCCGTGCCGCGGAACCTGGGCGAGGTGTTGAGCTGGGAGGAAGAGCGCGTGGTGCAGGGGGACTGGACGGTGACGTGCGGCGGGCA
GCGCTATCAGTTGGACCGGCAGCACGAGGCGATGAGCCTGGTGCGGCGCAAGGTGATCGTGCGGCGCCTGCGCACCGGGCGAGTGCAGTTGGTGCACCGG
GGCAAGGCGCTCAAATGGCGGGCCCTGCCGGCCGGCGCGCCGAGGAAGCAAGGCGTGGCGAAGCAGAAGCCCGAGCCCCGGCCCACCCCGAAAGCGAACG
TGCCTGCGGAAAGCCATCCGTGGCGGCGCGCGGGAGTGGGGGCCGGGAGAAGGTTTTGGCAGGAGGTCCGAGCGCGTGGGAAGCAGATGCGTATGGCGGC
GCGGCTGGGGGTGCGGGACTCCGGTCGGCCTCCGCTCCGCTCCGGCCTCCCTGCGTCCCGCACCCCCAGCCGGGGAAACGGACAAGCAACAACACAGGGG
ACATTCTCTCGTGAGTTAAACAGGGGACATTTCTAAAGAGTTTTGACA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1434 bp477 aa1031536+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSRKERARLTIMTGVTDGKLTVVQAAELMGVCYRQGKRIWQRYRADGDAGLVHRLRSKASARRKPAALREQVLALYAQERYADFGPTLMAEQLAKQKLVV
DHETLRRWRMAAGQHVVRRRKQAHRQWRERKPSFGAMVQLDGSHHDWFEGRGPKCVLMVMVDDATNRMRARFFEEETTRASYDVLEGWVSKHGLPASLYV
DRDSIYRCEGEPSIAQQLAGKAPQTQFGRAMEHLGVELILAHSPQAKGRVERMNGTLQDRLVKELRLAGISDIESANRFLDAKYLRAFHRQFGRVAASPL
DVHRAVPRNLGEVLSWEEERVVQGDWTVTCGGQRYQLDRQHEAMSLVRRKVIVRRLRTGRVQLVHRGKALKWRALPAGAPRKQGVAKQKPEPRPTPKANV
PAESHPWRRAGVGAGRRFWQEVRARGKQMRMAARLGVRDSGRPPLRSGLPASRTPSRGNGQATTQGTFSRELNRGHF

 

Blast result :
Comments
ISVer3 is 61% aa similar to ISNitsp1.
References
1] Patricia Siguier (2020)Direct submission.
2] Wolfe,R., Danczak,R. and Wilkins,M. (2019) Direct GenBank submission.