ISAju2

  • Family IS1202
  • Group ISAba32
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP077416 ND Acinetobacter junii
Acinetobacter junii ZM06 plasmid unnamed
DNA section
IS Length : 1456 bp

Ends


IR Length : 19/24

IRL : TGTAAGCCCAAAATAGAAATGTCCGGTTTCTCCAAAGTAAAAATGTCCGC
IRR : TGTTATTCCCAAGTAGAAATGTCCTATACAGGCATTTCCAAGTCAAGCAC

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

TGTAAGCCCAAAATAGAAATGTCCGGTTTCTCCAAAGTAAAAATGTCCGCTTTTAGAATATGCGTATTTGCAATTTTCTTAGCGGACTGCTTGATATGTT
GGTGTCTATGTCGGATAAAGAACTTAAACGATTGTCAGTCTTGCAAGAAATCTGTGATCAACGCATTAGCCAGTCTCAGGCTGCTCAGCTACTTCATATT
TCAGAGCGTCAAATCAGACGCTTATTGCAAAAATACAAAGTTCAAGGTCCAGCTGCTTTAGCCCATGCGGCACGTGGCCAACCCAGCAACTCTAAGATTC
CTGAAGAACTCAGACTGAAGTGCCTCAATATTGTTTCTGATCAATTTCATGGTTTCGGACCCACCTTAGCCCACGAAAAGCTGACCACCGTTCATGGCTT
TGATATTTCCGTGGAAACATTGCGTTCCTGGATGATTGCAGCCAATTTGTGGATTCCTCGCTCTAAACGCCTGAAACGACCCTATCAGCCTCGATATAAC
CGGGATTGTTATGGTGAACTGATCCAAATTGATGGCTCACACCATGACTGGTTCGAAGGACGTGCTCCTAAATGCTGTCTACTAGTGTTTATTGATGATG
CCACAGGAAAACTACAGCATTTACGCTTCTGTGAATCAGAATCAACCTTTGACTATATGCTCTCAACTAGAGCCTACATTGAACAACTCGGTAAACCATT
GGCGTTTTACAGTGACAAGCACTCTGTCTTTAGAGTGAATCAAAGCAGTAAGAAAGACACCAAGATTACGCAATTTGGGCGCGTACTCAACATGCTCAAT
ATCGACATCATCTTCGCCAACTCACCACAGGCCAAAGGTCGTGTAGAATGCGCCAATAGAACACTACAGGATCGTTTGATCAAAGAGATGCGACTAGAAG
GCATCTCCTCAATTGCCGAAGCAAATATTTGGTTACCCCGCTTTATTGAGCAGTTCAATCTAAAATTTGTGAAGATAGCCTTTAATCCCAAGGATCTACA
CCGGAGTGTCACTGAAACCCCTGAGGAATTAGATGATATTTTTACTTGGCGTGAGCCACGTAGAGTCACCAACAGCCTGACCATTACGTATGATAAATGC
GTATATATACTGGAAAGTACAGAAGAAAATCAAAAGCTGATCGGCAAATATATTGAGTTCCTAGAATATCCAGATGGGACTGTAGCCATTGAATATCAAG
GGAGAAAGATCACCTATAGCATCTTCGATAAATTAAGTCAGCTTAACCAGCGAGAGATTGTTGAGAATAAACGTTTGGGTTCTGTGCTGGCACATATTCA
ACAGCAGCATGAAGAATTGGAACAGCATAACCAACGGAATCGTTCTCAAAAGATGCCAAGTAGACGTGCACAGAAGACAGCTATTCAACAGCGAAATCTA
AATCCTGTGCTTGACTTGGAAATGCCTGTATAGGACATTTCTACTTGGGAATAACA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1374 bp457 aa601433+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MRICNFLSGLLDMLVSMSDKELKRLSVLQEICDQRISQSQAAQLLHISERQIRRLLQKYKVQGPAALAHAARGQPSNSKIPEELRLKCLNIVSDQFHGFG
PTLAHEKLTTVHGFDISVETLRSWMIAANLWIPRSKRLKRPYQPRYNRDCYGELIQIDGSHHDWFEGRAPKCCLLVFIDDATGKLQHLRFCESESTFDYM
LSTRAYIEQLGKPLAFYSDKHSVFRVNQSSKKDTKITQFGRVLNMLNIDIIFANSPQAKGRVECANRTLQDRLIKEMRLEGISSIAEANIWLPRFIEQFN
LKFVKIAFNPKDLHRSVTETPEELDDIFTWREPRRVTNSLTITYDKCVYILESTEENQKLIGKYIEFLEYPDGTVAIEYQGRKITYSIFDKLSQLNQREI
VENKRLGSVLAHIQQQHEELEQHNQRNRSQKMPSRRAQKTAIQQRNLNPVLDLEMPV

 

Blast result :
Comments
ISAju2 is 94% aa similar to ISApi2.
References
1] Patricia Siguier (2020) Direct submission.
2] Wang,X. (2021) Direct GenBank submission.