ISArse1
- Family IS5
- Group IS903
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| CP038155 | ND | Arsenophonus endosymbiont | Arsenophonus endosymbiont of Aphis craccivora |
DNA section
IS Length : 1055 bp
Ends
IR Length : 18
IRL : GGCTTTGTTGAATAAATCGAACTTTTAGGTGATTGGCGGAGCTGATCGCT
IRR : GGCTTTGTTGAATAAATCAGAATTAGCCGACAGGATGGCTCCCTCTGCTA
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| tgatggtaaattagtaggttacagcggtgggttagatataaaaagttggc | gtttagatt | atgaaaagaatggaaatagtcgaaaaattggctaaaaatgttataataaa | 9 |
DNA sequence
GGCTTTGTTGAATAAATCGAACTTTTAGGTGATTGGCGGAGCTGATCGCTAAATTCGTTTCAACATCAGGTCCCCATGTCAAAGCAAAAGTTTAAAATTA
CCAACTGGCCCGCGTACAACAAGGCACTCAGACAACGCGGTTCCCTGACGGTCTGGCTTGATGAGTCGGCCATCGCTGGATGGACTGACAGTTCTTCGCC
TGAAGGTCGTGGCCGGCCGCTTTACTACAGCGATATGGCTGTTACCACTGTCCTGATGATGAAGCGTGTGTTTAACCTGTCGCTCCGGGCATTACAGGGC
TTCGTTGATTCGATTTTTAAACTCATGTCTTAGCCGCTGTGCTGTCCGGACTACTCGCTGGTCAGCAGACGAGCAAAGAGCGTAAACATCAGCATAAAAA
CGCCAACGCGTGGTGAAATCTCGCATCTGGTCATCGACAGTACCGGTCTGAAGGTCTTTGGCGAAGGTGAAAGGAAAGTCAGGCAGCATGGGGCTGACAG
ACGAAGAGTGTGGCGCAAGCTTCATCTGGCAGCAGACAGTGTGACTCATGAGATTATCTGTGCCGACTTATCGCTAAGCGGAACGACAGATGCGCAGGCA
CTGCCGGGCCTGATTAACCAAACCCACCGGAAAATCAGGGAAGTGTCAGCAGACGGTGCTTATGACGCCTATTACTGCCAAGATGCGTTGCTAAGAAAGA
AAATCAGGCCCCTTATCCCGCCGCGAAGCGGAGCGAAATACTGGCCGGACAAGTACCATGAACGTAACCATGCGGTGGCGAATCAGCGTCTGAGCAGGAG
TAATGATATGTGGAAAAAGAAAGTGGGTTATCACCGGCGTTCAGTGGCAGAAACAGCAATGTTCCGCATAAAAACTTTGCTGGGTGGCCATCTGAGGCTG
CGTGACTATGAGGCTCAGGTAGGTGAAGCAATGGCGATGGTCAAAGCGCTGAACCGTATGACGTTGTTGGGTATGCCACACAGCGTCAGGATCGGATAAC
AGCTGTAGCAGAGGGAGCCATCCTGTCGGCTAATTCTGATTTATTCAACAAAGCC
CCAACTGGCCCGCGTACAACAAGGCACTCAGACAACGCGGTTCCCTGACGGTCTGGCTTGATGAGTCGGCCATCGCTGGATGGACTGACAGTTCTTCGCC
TGAAGGTCGTGGCCGGCCGCTTTACTACAGCGATATGGCTGTTACCACTGTCCTGATGATGAAGCGTGTGTTTAACCTGTCGCTCCGGGCATTACAGGGC
TTCGTTGATTCGATTTTTAAACTCATGTCTTAGCCGCTGTGCTGTCCGGACTACTCGCTGGTCAGCAGACGAGCAAAGAGCGTAAACATCAGCATAAAAA
CGCCAACGCGTGGTGAAATCTCGCATCTGGTCATCGACAGTACCGGTCTGAAGGTCTTTGGCGAAGGTGAAAGGAAAGTCAGGCAGCATGGGGCTGACAG
ACGAAGAGTGTGGCGCAAGCTTCATCTGGCAGCAGACAGTGTGACTCATGAGATTATCTGTGCCGACTTATCGCTAAGCGGAACGACAGATGCGCAGGCA
CTGCCGGGCCTGATTAACCAAACCCACCGGAAAATCAGGGAAGTGTCAGCAGACGGTGCTTATGACGCCTATTACTGCCAAGATGCGTTGCTAAGAAAGA
AAATCAGGCCCCTTATCCCGCCGCGAAGCGGAGCGAAATACTGGCCGGACAAGTACCATGAACGTAACCATGCGGTGGCGAATCAGCGTCTGAGCAGGAG
TAATGATATGTGGAAAAAGAAAGTGGGTTATCACCGGCGTTCAGTGGCAGAAACAGCAATGTTCCGCATAAAAACTTTGCTGGGTGGCCATCTGAGGCTG
CGTGACTATGAGGCTCAGGTAGGTGAAGCAATGGCGATGGTCAAAGCGCTGAACCGTATGACGTTGTTGGGTATGCCACACAGCGTCAGGATCGGATAAC
AGCTGTAGCAGAGGGAGCCATCCTGTCGGCTAATTCTGATTTATTCAACAAAGCC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 924 bp | 307 aa | 76 | 999 | + | No |
Chemistry : DDE
ORF sequence :
MSKQKFKITNWPAYNKALRQRGSLTVWLDESAIAGWTDSSSPEGRGRPLYYSDMAVTTVLMMKRVFNLSLRALQGFVDSIFKLMS*PLCCPDYSLVSRRA
KSVNISIKTPTRGEISHLVIDSTGLKVFGEGERKVRQHGADRRRVWRKLHLAADSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREVSADGAYDAYY
CQDALLRKKIRPLIPPRSGAKYWPDKYHERNHAVANQRLSRSNDMWKKKVGYHRRSVAETAMFRIKTLLGGHLRLRDYEAQVGEAMAMVKALNRMTLLGM
PHSVRIG
KSVNISIKTPTRGEISHLVIDSTGLKVFGEGERKVRQHGADRRRVWRKLHLAADSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREVSADGAYDAYY
CQDALLRKKIRPLIPPRSGAKYWPDKYHERNHAVANQRLSRSNDMWKKKVGYHRRSVAETAMFRIKTLLGGHLRLRDYEAQVGEAMAMVKALNRMTLLGM
PHSVRIG
Blast result :
Comments
236 copies in the genome
References
1] Mahillon J. (2023) Direct submission.
2] White JA, Kratovil JD. A high prevalence insertion sequence dominates the genome of the Arsenophonus endosymbiont of an aphid. Unpublished.
2] White JA, Kratovil JD. A high prevalence insertion sequence dominates the genome of the Arsenophonus endosymbiont of an aphid. Unpublished.